Filimonas lacunae: FLA_5464
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Entry
FLA_5464 CDS
T05172
Name
(GenBank) RNA polymerase ECF-type sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
fln
Filimonas lacunae
Pathway
fln02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
fln00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FLA_5464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fln03021
]
FLA_5464
Transcription machinery [BR:
fln03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FLA_5464
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
Sigma70_ECF
HTH_24
HTH_10
GerE
HTH_11
DUF6456
HTH_Tnp_4
HTH_23
HTH_Mga
DUF8612
PCI
HTH_Crp_2
HTH_AsnC-type
HU-CCDC81_euk_2
HTH_28
Crp
HTH_69
DUF6362
HTH_7
Fn3_ELFN
Motif
Other DBs
NCBI-ProteinID:
BAV09416
UniProt:
A0A173MPK0
LinkDB
All DBs
Position
complement(6691885..6692475)
Genome browser
AA seq
196 aa
AA seq
DB search
MPLLSSVPYSEKELLLRVSNGDEAAFRQLFYQFHHRLGIFIYQVTASHELAEEIVQDVFL
KIWTERKQLTTVHNFNAWLYILSKNQALNALRKIVNERRHQQRWSQEQRETEWTEDGSFT
DAAIDLLDKAVQQLPPQQQKVFILSRYQRLTYQDIAQQLNLSRETVKYYLRLAMQSIAQY
MTNHTYLLWLVLLGGL
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
ttgccattgctttcatctgttccgtatagtgaaaaagagttgcttttacgcgtttccaat
ggagacgaggccgcctttcgccagttattttatcaatttcatcaccggctgggtattttt
atttatcaggttactgcttctcatgaattggctgaggaaatagtgcaggacgtattttta
aagatttggacagagcggaaacaactgaccactgtacataacttcaatgcctggttatat
atactttctaaaaatcaggcgttaaatgcccttcgtaaaattgtgaatgagcgccgccac
cagcaacgttggagccaggagcagcgggaaacagagtggacagaagatggtagctttacc
gatgctgccattgacctgttagataaagcggttcaacaattgccaccacagcaacaaaag
gtatttattctcagccgttatcagcgtcttacttaccaggatattgctcaacagctcaat
ctttcccgagaaaccgtgaagtattacctgcgattagccatgcaatctattgctcaatac
atgaccaaccatacttacctgctctggctggtgttgcttggaggactataa
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