Filimonas lacunae: FLA_5627
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Entry
FLA_5627 CDS
T05172
Name
(GenBank) RNA methyltransferase, TrmA family
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
fln
Filimonas lacunae
Brite
KEGG Orthology (KO) [BR:
fln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fln03009
]
FLA_5627
Enzymes [BR:
fln01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
FLA_5627
Ribosome biogenesis [BR:
fln03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FLA_5627
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
TRAM
Methyltransf_25
Cons_hypoth95
Methyltransf_15
PrmA
TRM5-TYW2_MTfase
N6_N4_Mtase
Methyltransf_12
UPF0020
Methyltransf_32
AviRa
Methyltransf_11
Methyltrans_SAM
Motif
Other DBs
NCBI-ProteinID:
BAV09576
UniProt:
A0A173MQ01
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Position
6888050..6889492
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AA seq
480 aa
AA seq
DB search
MRNKKKSIVLQDVLVEDYAAEGKSLARVDGKVVFIEKAVPGDVVDIQLSKNKKDWAEGHA
IRIKKYSADRVEPFCEHFGICGGCQWQMLPYQKQLHYKHKQVTDNLQRIGKLPLPEIQPI
AGCEETRYYRNKLEYTFSTKRFIPQSEFEALKKIQAESGQGFEFTEKTGVAGFHAKGMFD
KLVEINTCHLQHEPTNLIRNAIAAYARQKKWSFYDIRQHEGWLRTMQVRLATTGELMVNI
VFGFENADNRKELLDYLLREFPQITTLLYTINTKKNDSLYDQEPIVYHGKGYIIETLEDF
RFKISPKSFFQTNSRQAEELYRITRDFAELNGSQTVYDLYCGTGSIGIFVSKLAKQIIGV
EVVAEAIEDAKENAELNGLQHASFYAGDVIDICDDAFFAKHGRPDVIITDPPRAGMHEKL
VQKLLEIAAPVVVYVSCNPATQARDLNLLGEKYTVEKIQPVDMFPHTLHIENVVQLKLKA
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
gtgagaaataaaaagaaatctattgttctacaggacgttctggtagaagattatgcggcc
gaaggcaagtcgctggcacgggtggacgggaaagtggtatttattgaaaaggccgttccc
ggcgatgtggttgacattcagctgtctaaaaacaaaaaagactgggccgaaggtcatgct
atccgtattaaaaaatactccgccgaccgtgtggagcctttttgtgaacattttggcatt
tgtggtggttgccaatggcaaatgctgccctaccaaaagcagttacactataagcacaag
caggtgaccgataacctgcaaaggattggcaaactgcctttgcctgaaatacaacctatt
gcgggttgtgaagaaacacgctactatcgtaataaactggaatatactttttctaccaaa
cggtttattccccagagcgaatttgaggccctaaagaaaattcaggccgaaagcggtcag
ggttttgaattcaccgaaaaaacgggggttgccggcttccatgccaagggcatgttcgac
aaactggtggaaattaacacctgtcacctccagcacgagcctaccaacctcatcaggaat
gcaattgcggcttatgcccggcagaaaaaatggtcgttttacgatatcaggcagcacgaa
ggctggttacgtaccatgcaggtgcgactggccaccaccggcgagttgatggtaaacatc
gttttcggctttgaaaatgcagacaatcgtaaagaattgctggactacctgttacgggaa
tttccgcagatcactacccttttatatactatcaataccaaaaagaacgacagtttatac
gaccaggaacctattgtataccatggcaaaggatatattattgaaaccctggaagatttc
cggtttaaaataagtcccaaatcgttcttccaaaccaatagccgccaggccgaagagctt
taccgcataacccgcgattttgccgagttgaatggctctcaaaccgtttacgatttatat
tgtggaacggggagtattggcatatttgtgagtaaattagccaagcagataataggtgtg
gaagtggttgcggaagctattgaagacgctaaagaaaatgcagaactgaatggtttgcag
catgcttctttttacgccggtgatgttatagatatctgtgatgatgctttttttgctaaa
catggccgtccggatgtaattattaccgatccgccacgcgccggcatgcacgaaaagctg
gtacagaagttattggaaatagcagcccctgtagtggtatacgtaagttgtaaccccgct
acacaggccagggatttaaacctactgggtgaaaaatatactgtggaaaaaattcagccc
gttgacatgtttccacacaccctgcatatagagaatgtagttcaattaaaactgaaagcg
tag
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