Filimonas lacunae: FLA_5859
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Entry
FLA_5859 CDS
T05172
Name
(GenBank) RNA polymerase sigma-24 factor, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
fln
Filimonas lacunae
Pathway
fln02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
fln00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FLA_5859
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fln03021
]
FLA_5859
Transcription machinery [BR:
fln03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FLA_5859
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
Sigma70_ECF
PhyR_sigma2
GerE
HTH_40
HTH_24
DUF7123
Mob_CxxC_CxxC
Motif
Other DBs
NCBI-ProteinID:
BAV09806
UniProt:
A0A173MQN7
LinkDB
All DBs
Position
complement(7138247..7138834)
Genome browser
AA seq
195 aa
AA seq
DB search
MQPTLDISYSGLMRLLLAGDEQVFEQVFKTHFKSLHAYAFTILNSEAVAEEMVQQVFYKL
WERKETVEVHTSLKAYLYRAVHNESINYLKHHTIKIKHQTYAMQQQQHQQEQSAGEKLAG
KELEQQIRQALNELPEQCRTIFQLSRYEELKYKEIADQLGLSIKTIESQMGKALKLLRVK
LADFLVLIISLLLYR
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgcagccaaccttagatatcagttattccggtttaatgcggctgttgctggcaggcgat
gaacaggtgtttgaacaggtgtttaaaacacactttaaaagcctgcatgcctacgccttc
accatactgaacagcgaagccgttgcggaagaaatggtgcagcaggtattttacaaacta
tgggaacgcaaagaaacagtagaagtgcacacctcgttaaaagcatatctgtaccgtgcg
gtacataacgaaagcatcaactacctgaaacaccataccattaaaatcaaacatcaaaca
tatgccatgcaacaacagcaacatcagcaggaacagagcgcaggggaaaagctggcaggc
aaagagctggaacaacaaatacgtcaggccttaaacgaactgcccgagcaatgccgcacc
atatttcagctaagcaggtacgaagagttgaagtataaagaaatagcagatcaactgggc
ctgagtataaaaaccatagagagccagatgggtaaggctttaaagctactgcgtgtaaag
ctggccgattttctggtacttattatatccttattgctttatcgttaa
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