Filimonas lacunae: FLA_6161
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Entry
FLA_6161 CDS
T05172
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
fln
Filimonas lacunae
Brite
KEGG Orthology (KO) [BR:
fln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fln03400
]
FLA_6161
DNA repair and recombination proteins [BR:
fln03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FLA_6161
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
AAA_22
DUF7125
AAA_14
AAA_24
nSTAND_NTPase5
AAA
ABC_tran
AAA_16
RUBY_RBDX
nSTAND3
NTPase_1
SLFN-g3_helicase
KdpD
AAA_5
DEAD
ATPase_2
FAM75
HypA
Motif
Other DBs
NCBI-ProteinID:
BAV10106
UniProt:
A0A173MRH5
LinkDB
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Position
complement(7487198..7488574)
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AA seq
458 aa
AA seq
DB search
MSKIKTAFFCSNCGYESAKWLGKCPSCNQWNTFIEEVLDKGNKNEQHNWKNYTETKRQGK
TIALSQVSSIEEERIVTADSELNRVLGSGIVPGSIVLVAGEPGIGKSTLFLQSALQLQDV
VTLYISGEESEQQIKMRADRLGIVNENFYLLTETSTQVIFQEIKKLKPQLVVVDSVQTLQ
SNFIESSPGSISQIRECAAEFQRFAKETNTPVFLIGHITKDGNIAGPKILEHMVDTVLQF
EGDRNYTYRILRTLKNRFGSTAELGIYEMLSSGMRPVSNPSEILITHKEDQLSGGAIAAT
MEGLRPLLIEVQALVTPSVYGTPQRTVSGFDLRRLQLLLAVLEKRGGFQFGLKDVFLNIA
GGLKVEDPSSDLAIICALLSSYEDVPIPQHICFAGEVGLNGEIRAVNRIEQRIAEAEKLG
FEKIVVSRYNQKNRDAVKHLNIEVLALGRVDEVYQLLF
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaataaaaacagcattcttttgcagcaattgtggttatgaaagtgcaaaatgg
ctgggcaaatgtccttcatgcaaccaatggaacacctttatagaagaagtgctggacaaa
ggcaataaaaacgaacagcataactggaaaaattacaccgaaaccaaacgccagggtaaa
accatagcccttagccaggtaagcagcattgaagaagaaagaattgttaccgccgacagc
gaattaaaccgtgtgttgggtagcggcattgtaccaggtagtatagtgttagtagcaggc
gaacctggtataggcaaaagcaccttgtttttacaaagcgcattgcaattacaagacgtg
gttaccttatatataagtggggaggaaagtgaacagcagattaaaatgcgggccgacagg
ttgggcattgtcaatgaaaacttctatttgcttaccgaaacttctacccaggtaattttc
caggagattaaaaagctaaagccgcaactggtggtggtagactctgtacaaacattacag
tctaactttatagaatcatctcccggcagcatttctcagatacgggaatgtgccgcagag
tttcaacgctttgccaaggaaaccaatacacctgttttcttaataggccatatcaccaaa
gacggcaacattgccggacctaagatattagaacatatggtagatacggtgctgcagttt
gaaggcgatcgtaactatacctaccgcatattgcgcacattgaaaaatcgctttggcagc
actgccgaactgggcatatatgaaatgctgtcttccggtatgcgtccggtgagcaaccca
tctgaaattctcatcacgcataaagaagaccagttaagcggtggagctatagcagccact
atggaaggcttgcgcccgttgttgatagaagtgcaggcactggttacccccagcgtatat
ggcaccccgcaacgcaccgtaagcggttttgatttaagacgtttacaattgctactggct
gtgctggaaaagcgtggcggatttcagtttggattaaaagatgtattcctgaacattgca
ggcggtttaaaggtagaagatccatcctccgacctcgcaattatatgtgccctgctttcg
tcgtatgaggatgttcctattccacaacatatttgctttgccggtgaggtaggccttaat
ggtgaaatacgcgccgtgaatcgtattgaacaacgtattgcagaagcagagaaactgggg
tttgagaaaattgtagtatcccgctataaccagaaaaaccgggatgcagttaaacacctg
aacatagaagtgctggcattaggccgtgtggatgaagtataccagttgttgttttaa
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