Filimonas lacunae: FLA_6208
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Entry
FLA_6208 CDS
T05172
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
fln
Filimonas lacunae
Pathway
fln03030
DNA replication
fln03430
Mismatch repair
fln03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FLA_6208
03430 Mismatch repair
FLA_6208
03440 Homologous recombination
FLA_6208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fln03032
]
FLA_6208
03400 DNA repair and recombination proteins [BR:
fln03400
]
FLA_6208
Enzymes [BR:
fln01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FLA_6208
DNA replication proteins [BR:
fln03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FLA_6208
DNA repair and recombination proteins [BR:
fln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FLA_6208
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
RuvB_N
AAA_22
RCF1-5-like_lid
Rad17
AAA_5
AAA_14
AAA_30
AAA_7
AAA_24
AAA_2
AAA_18
AAA_19
RNA_helicase
nSTAND3
AAA_33
AAA_16
Mg_chelatase
Mre11_C
AAA_assoc_2
Sigma54_activ_2
CPL
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
BAV10148
LinkDB
All DBs
Position
7540705..7542609
Genome browser
AA seq
634 aa
AA seq
DB search
MDKFIVSARKYRPQEFDTVVGQAHITTTLKNAIKNSQLAHAFLFCGPRGVGKTTCARILA
KTINCESLKPDGEACNQCNSCRTFNEGTSLNIHELDAASNNSVDDIRSLVEQVRFAPQAG
KYKVYIVDEVHMLSASAFNAFLKTLEEPPSYAIFILATTEKHKILPTILSRCQIFDFKRI
TGNDTVDHLQSIADKEEIKAEKGALQVIAQKSEGCMRDALSILDKIVSFTNGEVTYHNTL
EHLNILDHDYFFRLLDYLMQQDLAGAMLLYDEINRKGFEGDLVLNGFAEFIRNLLVCKDP
RAAVLLDVVEGMQNKYTSTAAKANGAYLVSALNILNEAEIHFKMARNKRLHVELTLIKLN
FLQQALELSVENGVVAKKKRIDGPLALKVRMIPSLQQKTAAATVGAKLYIDNQGGVARPP
QPNGGASGGSMHNGNGGFTNGGTSTAGNPGMNNVVVNTGAAVAEPQGRAPVVPMNRTALP
AKGKKSLLDTLRDKYGDQYQIEEVKEALPLSMERLREVWDAYAQKLEGMQKPSAANTFRL
SKINIESEVRFSVTVNSLIQQTFIEQERIILLDTIQQHFYNRSIAYYVILNEEEEAEEVP
VNLGLNSRQKFDKLSDTYPWLRELKDRLKLELDY
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggataagtttattgtttcggcgaggaagtacaggccccaggagtttgatactgtggtg
gggcaggcgcatattaccacaacactcaaaaatgccattaagaacagccagctggcgcat
gccttcctgttctgcgggccacgtggtgtaggtaaaaccacctgcgcgcgtatattggcc
aaaactattaactgtgagagtttaaaaccggatggggaagcctgtaaccagtgtaattcc
tgtcgcaccttcaatgaaggcacttcattgaatattcacgagctcgatgctgccagtaac
aactcggtagatgatatccgctcactggtagagcaggtgcgttttgcgccacaggccggt
aaatataaagtatatattgtggatgaggtgcacatgttaagtgccagcgcctttaacgcg
tttttgaaaacgctggaagagccgccatcctatgccatttttatattggccactaccgaa
aagcataagatattaccaaccattctttcccgatgtcagatattcgactttaaacgtatt
accggtaacgatacggtagatcacttacagtcaatagcagataaggaagagattaaggcc
gaaaaaggtgccttacaggtaattgcccagaaaagcgaaggctgtatgcgggatgcattg
agtatcctggataaaatagtcagctttaccaatggggaagttacctaccataacaccctg
gagcacctgaacatactggaccatgattactttttccgcttactggattacctgatgcaa
caagacctggccggagccatgctgttgtatgatgaaattaaccggaaaggttttgaaggc
gacctggtattgaacggttttgctgaatttatacgtaacctgctggtatgtaaagatccg
cgagcggcagtgttattagatgtggtagaaggcatgcagaacaagtatacgtctactgct
gctaaagcaaacggcgcttacctggtaagtgcactgaatattttgaatgaagcggagatt
cattttaaaatggcgcgtaacaaacgcctgcacgtagagcttaccctcatcaaactcaac
tttttacagcaggcattggaactcagcgttgaaaacggtgtggtagcaaaaaaaaaacga
attgatggtccccttgcgctaaaagtgcgcatgattccttccctgcagcaaaaaacagct
gctgctacagtaggggctaaattatatatcgacaaccaggggggagttgcaaggcccccg
caacctaacggcggtgcgtctggtggaagcatgcacaatggtaatggtggttttaccaac
ggtgggacttcgacggcaggtaatcccggtatgaacaatgtggtggtgaacacgggcgcc
gcagtggccgagccgcagggtcgtgccccggtagtgcccatgaacagaacagcattacct
gctaaaggcaagaagtcgttgctggatacactgcgtgataagtatggcgatcagtaccag
attgaagaagtaaaagaagcattgcctttaagcatggaaaggctgcgtgaggtatgggat
gcttatgcgcaaaagctggaagggatgcaaaagccttctgccgccaatactttcaggctt
agtaaaattaacattgagtcggaagtgcgttttagcgtaacagtaaactcactgattcag
caaacctttattgagcaggagcgcattatcttactggatactattcaacagcatttctat
aaccgcagtatagcctattatgtgatattgaacgaggaggaagaagcggaagaggtaccg
gtaaatttaggcttaaacagccgtcagaagtttgataagctatctgatacttatccgtgg
ttaagagagttaaaagacaggctgaagctggaactggattattaa
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