Flavobacterium litorale: K1I41_05220
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Entry
K1I41_05220 CDS
T08396
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
flo
Flavobacterium litorale
Brite
KEGG Orthology (KO) [BR:
flo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
flo03016
]
K1I41_05220 (truB)
Enzymes [BR:
flo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
K1I41_05220 (truB)
Transfer RNA biogenesis [BR:
flo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
K1I41_05220 (truB)
Prokaryotic type
K1I41_05220 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QYJ69291
LinkDB
All DBs
Position
complement(1174539..1175231)
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AA seq
230 aa
AA seq
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MATPEDFTNGKILLIDKPLTWSSFQAVNKIKWSLKKHLGLKKIKVGHAGTLDPLATGLLI
ICTGKFTKQITELQGMEKEYTGTFYIGATTPSYDLETEIDATFATDHIDENLIQNTIPQF
LGEIDQKPPIFSAIKKDGKRLYEHARKGEEVEIASRKTTIHEFEITRIALPEVDFRVVCS
KGTYIRSLAYDYGKALQSGAHLTALRRTKIGNFSVTDAIAPETFENEVEN
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
ttggcaacacccgaagattttaccaacggaaaaattctacttatagataaaccgctaaca
tggagctcctttcaggcagtaaataaaataaagtggagcttaaaaaagcaccttgggctt
aaaaaaataaaggtagggcacgcaggcacgctagaccctttggctacaggtttacttata
atttgtacgggtaaatttaccaaacaaattaccgagttacagggcatggaaaaagagtac
acgggtaccttttacattggcgctacaacaccatcgtacgatttggaaaccgaaatagat
gccacttttgctacagatcatattgatgaaaacctcatccaaaacaccattccacaattc
ttgggtgaaatagaccaaaaaccacctattttttctgccataaaaaaagatgggaaacgc
ctgtacgagcatgcgcgtaaaggtgaagaagtcgaaattgcatcacgtaaaaccaccata
cacgagtttgaaattacgcgtattgcactacccgaagttgattttagggtagtttgcagt
aagggcacttacattcggtcgttagcgtacgattatggtaaagcactacaatcgggtgcg
caccttacggcattacgccgtactaaaataggtaacttctctgttactgatgcaatagca
cctgaaacctttgaaaatgaagttgaaaattaa
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