Flavobacterium litorale: K1I41_05690
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Entry
K1I41_05690 CDS
T08396
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
flo
Flavobacterium litorale
Pathway
flo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
flo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K1I41_05690 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
flo03400
]
K1I41_05690 (ruvB)
Enzymes [BR:
flo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K1I41_05690 (ruvB)
DNA repair and recombination proteins [BR:
flo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K1I41_05690 (ruvB)
RecFOR pathway proteins
K1I41_05690 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_22
AAA_5
Mg_chelatase
AAA_3
Rad17
nSTAND3
AAA_18
AAA_14
TsaE
RNA_helicase
TIP49
NB-ARC
AAA_16
AAA_28
AAA_33
AAA_PrkA
AAA_17
AAA_24
ABC_tran
Torsin
NPHP3_N
RsgA_GTPase
NACHT
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QYJ69380
LinkDB
All DBs
Position
1286481..1287503
Genome browser
AA seq
340 aa
AA seq
DB search
MNENLDPTTNNYNAEELDLEKKLRPLSFNDFTGQDQVLENLQIFVKAANLREEALDHTLF
HGPPGLGKTTLANILANELGVGIKITSGPVLDKPGDLAGLLTNLDDRDILFIDEIHRLSP
IVEEYLYSAMEDFRIDIMIESGPNARSVQINLNPFTLVGATTRSGLLTAPMRARFGIASR
LQYYTTELLTTIVQRSSAILNMPITMEAAIEIAGRSRGTPRIANALLRRVRDFAQIKGNG
KIDIEIARYSLKALHVDAHGLDEMDNKILTTIIDKFKGGPVGLSTLATAVSESGETIEEV
YEPFLIQEGFIMRTPRGREVTEKAYKHLGKIKLGGQSLFD
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaaatttagaccctacaaccaataattacaacgcggaagagctagacctagaa
aaaaagctccgcccgctctcgtttaatgattttacgggtcaggatcaagtcctcgaaaac
ctacaaatatttgtaaaggcagctaatttaagagaggaggcattagaccatacccttttt
catggtcctccaggtttgggtaaaacaaccttggccaatattttagcgaatgagctgggt
gtagggattaaaataacctcaggacctgtgttggataaaccaggcgatttagcgggactg
ttaaccaatcttgatgatagagatatattatttatagacgaaatacaccgcctaagccca
atagtagaagagtacctatattcagcaatggaggattttcgtattgatattatgatagaa
tcggggcctaacgcccgctccgtacaaataaacttaaacccttttacgctagtaggtgct
accacacgctcgggcttgcttaccgcccccatgcgtgcccgttttggcattgctagccga
ttacaatattacaccacagaattgcttacaaccattgtgcaacgtagttcggcaatactt
aatatgcccattactatggaggcagctatagaaattgcagggcgcagccgtggtacaccc
cgtattgccaatgcactattgcgtagggtacgcgattttgcacaaataaaaggcaatggc
aaaattgatattgaaatagcacgttattcattaaaggcgctgcatgtagatgcacatgga
cttgatgagatggacaataaaatactaaccaccattatagataaatttaagggtggtcct
gtagggctatctacattggcaacagcagtatccgaaagtggcgaaactatagaagaagtg
tatgaaccctttttaatacaagaaggttttattatgcgtaccccccgtggtagagaagta
accgagaaagcgtataagcacttgggtaaaattaaactaggcggacaaagcctttttgat
taa
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