Flavobacterium litorale: K1I41_06230
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Entry
K1I41_06230 CDS
T08396
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
flo
Flavobacterium litorale
Pathway
flo02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
flo00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
K1I41_06230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
flo03021
]
K1I41_06230
Transcription machinery [BR:
flo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K1I41_06230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
DUF6285
PgaD
Motif
Other DBs
NCBI-ProteinID:
QYJ67171
UniProt:
A0ABX8V2U7
LinkDB
All DBs
Position
complement(1410652..1411515)
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AA seq
287 aa
AA seq
DB search
MRQLKITKQVTNRETASLDKYLQEIGKVDLITADEEVELAQRIKAGDQRALEKLTKANLR
FVVSVAKQYQNQGLTLPDLINEGNLGLIKAAQRFDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNKIGSINKINKMYALLEQSSERAPSAEEIAKELDMTVNDVKESMKNSGRHL
SMDAPLVEGEDSNLYDVLRSGESPNPDRELIHESLRTEIERALETLTPREADVVRLYFGL
GDQHPMTLEEIGETFDLTRERVRQIKEKAIRRLKHTSRSKILKTYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagacagcttaaaataaccaagcaggtaaccaatagggaaactgcatctttagacaag
taccttcaggaaattggaaaagtagatttaattacggcagatgaggaggtagagttagca
caacgtattaaagctggagaccagcgcgcacttgaaaaacttacaaaagccaacctacgt
ttcgtagtatcggtagcaaagcaatatcaaaatcaaggattaacacttcccgaccttatt
aatgagggtaatttggggttaattaaagctgcgcaacgttttgatgaaacacgtggtttt
aaatttatatcctatgcggtatggtggattcgtcagtcgatattgcaagcacttgccgag
caatcgcgtattgtacgacttccgcttaataaaattggctccataaacaaaattaataaa
atgtatgctttgcttgagcaaagtagtgagcgtgcgccttcggcagaagaaattgccaaa
gagcttgacatgactgttaatgatgttaaggagagcatgaaaaactcagggcgtcaccta
tctatggatgcgccgttggttgagggtgaagactccaatctttatgatgtattgcgttcg
ggcgaatcgccaaacccagaccgtgagttgatacacgagtcgcttcgtacagaaattgaa
agagcattggaaacgcttacaccacgcgaggcagatgttgtgcgcctttattttggatta
ggtgaccagcacccaatgacactagaggaaattggtgaaacttttgaccttactagagag
cgcgtacgccagattaaagaaaaggcaatacgaagattaaaacatacctctcgtagcaaa
atactaaaaacctatcttggataa
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