Flavobacterium litorale: K1I41_06330
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Entry
K1I41_06330 CDS
T08396
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
flo
Flavobacterium litorale
Brite
KEGG Orthology (KO) [BR:
flo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
flo03032
]
K1I41_06330 (topA)
03400 DNA repair and recombination proteins [BR:
flo03400
]
K1I41_06330 (topA)
Enzymes [BR:
flo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
K1I41_06330 (topA)
DNA replication proteins [BR:
flo03032
]
Prokaryotic type
DNA Topoisomerases
K1I41_06330 (topA)
DNA repair and recombination proteins [BR:
flo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K1I41_06330 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QYJ67191
LinkDB
All DBs
Position
1430726..1433242
Genome browser
AA seq
838 aa
AA seq
DB search
MAKNLVIVESPAKAKTIEKFLGKDYRVESSYGHIADLPSKEIGVDVANGFQPKYEVSPDK
KSLVKKLRDLSKSAETVWLASDEDREGEAIAWHLAEELKLDKEKTKRIVFHEITKSAILK
AIENPRDINYNLVNAQQARRVLDRLVGYELSPVLWKKVKTGLSAGRVQSVSVRLIVERER
DIQNFDSQPSYSVTAEFANESGKTFKAKLPKNFSTKEEAQDFLNKNIGSIYKVSNLETKP
GKKSPAAPFTTSTLQQEAARKLYFPVGVTMMLAQRLYEAGLITYMRTDSVNLSNDAMSAA
EAEIIKSYGQSFSKPRNYATKSKGAQEAHEAIRPTDMTRHTVNIDRDQARLYDLIWKRTL
ASQMSDAQLERTNVKIEANNHSEVFSASGEVLKFEGFLKVYLEGSDDEDVEQEGMLPALR
VSEKLINNYITATERFSRPPARYTEAALVKKLEELGIGRPSTYAPTISTIISRNYVEKGT
FEGQERSYKQLTLQNDKVNVQELSEITGSNKGKLVPTDIGIIVNDFLVSHFDTILDYNFT
AKVEQDFDEIASGNENWTAMMDDFYSHFHPTVQDVEKNAERESGERILGKHPESGKPVSV
RLGKFGPMAQIGDAEDEEKQFASLLPEQNIGTITLDEALTLFLLPKNLGTYKGEEVEVNN
GRFGPYVRFGKTFVSLPKGEDPLDVTFDRAKELIIEKEKADAPIATYKDMPVQKGVGRFG
PFLKWNGMFINVNKKYDFDNLSHQDIVTLIEEKIQKEIDKVIHNWEDEGIRVEKARWGRS
VIIKGKTKIELSKDVDAAALSLDEVKAIIEQKAPAKKTTAKKTTAKKTTTRKTVAKKK
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaatttagtgattgttgagtcgcctgctaaggcaaagactatagagaaattt
ttaggaaaagattaccgcgtggagtcgagttatgggcatattgctgatttgccctctaag
gaaataggggtagatgtagccaatggttttcagcctaaatatgaggtatcgcccgacaaa
aaatcgttagttaaaaaactcagagatttatctaaatctgccgaaaccgtttggctagca
agtgatgaagaccgtgaaggagaggcaatagcatggcaccttgccgaagagcttaaactg
gataaagaaaaaacaaagcgtattgtttttcacgaaattaccaaatcggcaattttaaaa
gcaatagaaaaccctagagatattaattacaatcttgtaaatgcgcagcaagcacgccgc
gtgttggatagattagtggggtacgaactttcgccagtattgtggaagaaggttaaaaca
ggactttcggcggggcgtgtgcaatcggtttctgtacgacttattgtggagcgtgaacgc
gatatacaaaattttgattcgcaaccatcgtatagcgttactgcagaatttgcaaacgag
agcggaaaaacatttaaagcaaagttgcctaaaaacttttcgacgaaagaagaagcacaa
gatttcctgaataaaaatatagggtctatatataaggtgtccaatttggaaactaagcct
ggtaaaaaatcgccagcagccccctttacaacttctacattacaacaggaagcagcacgt
aaactgtactttcctgtaggtgttaccatgatgttggcacaacgactgtatgaagcagga
ctaattacctatatgagaacagatagtgtaaacctatctaacgatgccatgagtgctgcc
gaagcagaaatcataaaatcgtatgggcagtcattcagtaagccacgcaactacgctacc
aaaagcaaaggggcgcaagaggcacacgaggcgatacgccctacagatatgacacgccat
actgtaaatatagaccgtgaccaagcaaggctttacgatttaatatggaaacgtacgcta
gcatcgcaaatgagcgatgcacagctagaacgtaccaatgttaaaattgaagccaataat
catagcgaagtattctcggcatctggagaagtgcttaaatttgaaggattcctgaaagtg
taccttgaaggtagtgatgatgaagatgtagagcaagagggcatgttgcctgcactccgc
gtaagcgaaaaattaattaacaactacattaccgcaacggaacgctttagccgaccaccc
gcccgttatacagaggctgcattggtaaagaaactggaggagttaggtatagggcgtccg
tctacctatgcacccaccatatctaccattattagcagaaattatgttgagaaaggtact
tttgaagggcaggagcgtagctacaaacaattaaccttgcaaaatgataaagtcaacgtt
caggagctatccgaaattacaggttccaataaagggaaactagtcccaaccgatattggt
attatcgtaaacgatttcttagtgagtcattttgatactatattagattataattttact
gctaaagtagagcaagattttgatgaaatagcatcgggcaacgagaattggacggcaatg
atggacgatttttacagccatttccatccaacagtacaagatgtagaaaaaaatgccgaa
cgcgaatcgggcgaacgtatactgggcaaacaccccgaaagtggtaagcctgtaagcgta
cgcttaggtaaattcggaccaatggcacaaataggcgatgcagaagacgaagaaaaacaa
tttgcaagtttactccctgagcaaaatataggcacaattacattagatgaagcactaacg
ttatttttactccctaaaaacttaggtacatataaaggagaagaagtagaggtaaataat
ggtcgttttggtccttacgttcgctttggtaaaacctttgtttccttacctaaaggagaa
gacccattggatgtaacttttgatagagctaaagaacttattattgagaaagaaaaagca
gatgcaccaatagccacgtataaagacatgccagtacaaaaaggagtagggcgctttggt
cctttcttaaaatggaacggtatgtttattaacgttaataaaaaatacgatttcgataac
ctttcgcatcaagatattgttacattaatagaagaaaagatacagaaagaaattgataag
gtaatccataactgggaggatgaaggcatccgtgtagaaaaagcccgttggggacgctct
gtaattataaaagggaaaacaaaaatagagcttagtaaagatgtagatgctgctgcccta
agtttagatgaggttaaagctattattgagcaaaaagcacccgctaaaaaaacaacagcc
aagaaaactaccgctaaaaagactacaactagaaaaacagtagctaaaaagaaataa
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