Flavobacterium litorale: K1I41_08925
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Entry
K1I41_08925 CDS
T08396
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
flo
Flavobacterium litorale
Pathway
flo03420
Nucleotide excision repair
flo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
flo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K1I41_08925
03430 Mismatch repair
K1I41_08925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
flo03400
]
K1I41_08925
Enzymes [BR:
flo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K1I41_08925
DNA repair and recombination proteins [BR:
flo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K1I41_08925
MMR (mismatch excision repair)
Other MMR factors
K1I41_08925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
ResIII
Motif
Other DBs
NCBI-ProteinID:
QYJ67667
UniProt:
A0ABX8V5A6
LinkDB
All DBs
Position
1970822..1973158
Genome browser
AA seq
778 aa
AA seq
DB search
MEIQKYISQLNEAQQAPTLQKDGPMIVIAGAGSGKTRVLTMRIAYLMSQGVDAFNILALT
FTNKAAREMKNRIADIVGSSEAKNLWMGTFHSVFAKILRFEADKLGFPSNFTIYDTQDSV
RLISAIIKEMQLDKDVYKPKQVLNRISSYKNSLITVKAYYNDPELQEADAMAKKPRLGEI
YEQYVERCFKAGAMDFDDLLLRTNELLNRFPEVLMKYQNRFKYILVDEYQDTNHSQYLIV
RALSDRFQNICVVGDDAQSIYAFRGANINNILNFQKDYDNVQMYRLEQNYRSTKNIVEAA
NSIIDKNQTKLDKIVWTANDEGPRIKVHRSLTDGEEGRFVASSIFELKMREQLKNGSFAI
LYRTNAQSRAMEDALRKRDIPYRIYGGLSFYQRKEIKDVLAYLRLVINPKDEEALMRVIN
YPARGIGNTTLEKLTVAANHYGRTVFDVMENLDRIDLKLNSGTKNKLQDFVTMIKSFQVI
DQSQDAFFLAEHITKKTGLIQELKKDATPEGIARIENIEELLNGIRDFIEGQKEVDGARG
SLAEFLEDVALATDLDKDTGDDDRVALMTIHLAKGLEFPYVFIVGMEEDLFPSAMSMNTR
SELEEERRLFYVALTRAEHQAYLTYAQSRYRWGKLVDSEPSRFIEEITDKYLEYITPIET
GYKYKPRINTDIFGDIDKSKLRQNKPTNGTPPKWVTGNEPKPDSNIRKLKPMSRPAPQGN
NATDTKLAVGNVVMHERFGKGQVLNLEGVGGDKKAEIKFEVGGIKKLLLRFAKLDVVG
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggaaatccaaaaatatataagccagttaaacgaagcacagcaagcacctacgctccaa
aaagatggtcctatgatcgtgatagcaggggcgggttcgggcaaaacgcgtgtactaacc
atgcgcattgcctacctaatgagccaaggcgtagatgcgtttaatatactggcacttacg
tttaccaataaagcagcgcgcgaaatgaaaaaccgtattgctgatattgtaggttcatcc
gaagctaaaaatttatggatgggaacattccactctgtatttgcaaagatattgcgtttt
gaagccgataaattaggatttccgtctaattttaccatatacgatacccaagatagtgtg
cgccttattagtgctattattaaggaaatgcaactggataaagatgtatataagcctaag
caggtattaaatcgtatctcatcgtataaaaatagccttattacggttaaagcgtattat
aatgaccctgaactgcaagaagccgacgcgatggcgaaaaaaccacgccttggcgaaatt
tatgagcagtatgtagagcgttgttttaaagcaggcgctatggattttgatgatttatta
ctgcgtaccaacgagcttttaaatcgttttccagaggtgctcatgaaataccaaaatcgt
tttaaatacatactggtagatgagtaccaagataccaaccattcacaatatttaatagta
cgtgccttaagcgaccgtttccagaatatttgtgtggtgggcgatgatgcacagagtatt
tatgcctttaggggggcaaatattaataacattttaaatttccagaaagattacgataat
gtacaaatgtacaggctggaacagaattaccgttctaccaaaaacatagtagaagctgcg
aactccataatagataaaaaccaaaccaaactggataaaatagtttggacggcgaatgat
gaaggaccacgaataaaagtacaccgtagccttaccgatggcgaagagggacgttttgtt
gccagtagcatatttgagcttaaaatgcgtgagcaacttaaaaatggaagctttgccata
ttgtatcgtaccaatgcacagtcccgcgccatggaggatgcactgcgtaagcgcgatata
ccctatcgtatttacggagggctttcgttttaccaacgtaaagaaattaaagatgtatta
gcctacctccgtttggtaattaaccctaaagatgaggaggcactaatgcgtgttataaac
taccctgcaaggggtataggcaacacaacgctagaaaaacttacggtagctgctaaccat
tacgggcgtactgtatttgatgtgatggaaaatttagaccgaattgatttaaaattaaat
tcgggtacaaaaaacaagttgcaagactttgtaacgatgataaaaagttttcaggtaatc
gatcagtcgcaagatgcgttttttttagccgaacacattaccaagaaaacaggattaata
caggaacttaaaaaagatgctacgccagagggtattgcgcgtattgaaaacattgaggag
ttattaaatggtattcgtgattttattgaagggcaaaaagaggtagatggcgcacgtggc
tcgttagctgaatttttggaggatgtagccttagctaccgaccttgataaagatacgggc
gatgatgatagggtagcccttatgactattcatcttgctaaaggacttgaatttccctat
gtttttatagtaggtatggaggaagatttatttccgagcgccatgagtatgaatacgcgt
agcgaactggaggaggagcgccgcttgttttatgtagcacttacccgtgccgaacatcag
gcataccttacctatgcgcaatcgcgttaccgttggggcaaactggtagatagcgaacca
tcgcgttttattgaggagattacagataaatacctagagtatattacccctattgaaacg
ggttacaaatacaaaccaagaattaataccgatatttttggcgatatagataaatccaaa
ctaaggcagaataaacctactaatggtacaccacccaaatgggttacaggtaacgagcca
aaacccgattcgaatattcgtaaattaaaacccatgtcacgacctgcaccgcaaggcaac
aatgcaaccgatacaaaattggctgtgggtaatgtagtaatgcacgagcgttttggtaaa
ggacaagtacttaacctagaaggggtaggaggcgataaaaaagctgaaattaaatttgaa
gtaggtggtattaaaaaattactattgcgctttgccaaattggatgttgtagggtaa
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