Flavobacterium litorale: K1I41_10240
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Entry
K1I41_10240 CDS
T08396
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
flo
Flavobacterium litorale
Brite
KEGG Orthology (KO) [BR:
flo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
flo03032
]
K1I41_10240
03400 DNA repair and recombination proteins [BR:
flo03400
]
K1I41_10240
Enzymes [BR:
flo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
K1I41_10240
DNA replication proteins [BR:
flo03032
]
Prokaryotic type
DNA Topoisomerases
K1I41_10240
DNA repair and recombination proteins [BR:
flo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K1I41_10240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF4430
Motif
Other DBs
NCBI-ProteinID:
QYJ67912
LinkDB
All DBs
Position
2247711..2248784
Genome browser
AA seq
357 aa
AA seq
DB search
MSGLQKKLEKIGNDPEITAKVAGLRYALQSDEGYTRQRKGKGFTYKDHEGNTVKDKKIRK
RIEKLVIPPAWEDVWISPYSNGHLQVTGIDAKGRKQYRYHPEWTKIRNQSKFYRLRRFAL
ALPDIRAQVEKDLRRQGLPYEKVVALVVKLMELTNIRIGNEAYKKLYGSFGLTTLRDKHV
KFKGNTVKFEFKGKKGVKHKIKLQSRRLANLVKRCKDVPGYELFQYYDDNNKHQSIGSTD
VNNYIKEITGEDFTAKDFRAWAGSINALCSFLDIGEYCNDTECKKKVVKVLDSVAEKLGN
TRTVCKKYYVHPTVIASYEKGSIWNYKPDRKNDDDFDADEKALLKLLTEENIAEVVA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgagtggattacaaaaaaagctcgaaaaaataggcaacgaccctgaaattactgccaaa
gttgctggtttgcgttatgccctacaatctgacgagggctatactaggcaacgaaaaggc
aaaggttttacctataaagaccacgaggggaatacggttaaagataaaaaaatacgcaaa
cggatagaaaaactcgtaataccgccagcatgggaggacgtttggatatcaccgtactct
aacgggcatttgcaagttacgggtattgatgccaaagggcgtaaacaataccgctaccac
cctgaatggactaaaatccgaaatcaatccaaattttatcgtcttaggcgttttgcgctt
gccctacccgatattagggcacaagtagaaaaagaccttaggcgacaaggattaccttac
gaaaaagtagtagcacttgtggtaaaactaatggaactcactaacatacgtattggcaac
gaggcgtataaaaaactatacggttcgtttgggcttaccacacttagagataaacacgta
aaatttaaaggcaataccgtaaaatttgaatttaaaggcaaaaaaggcgttaaacacaaa
ataaaactacagagccgtagacttgccaacttggtaaaacgttgtaaagatgtgccaggt
tacgaactctttcaatactacgatgataacaataaacaccagagtatcggctctaccgat
gtaaacaactacattaaagagattacaggcgaagattttaccgctaaagattttagggct
tgggcaggtagtattaacgccctatgttcttttttagatattggtgagtattgtaatgat
accgaatgcaaaaagaaagtagtaaaggttttagatagcgttgcagaaaaattaggcaat
acccgtactgtatgcaaaaaatactacgtacaccctaccgttatagcatcgtacgaaaaa
ggttctatttggaattataaacccgacaggaaaaacgacgacgattttgatgcagatgaa
aaagcactccttaaactattaaccgaagaaaacatagccgaagtagttgcctga
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