KEGG   Flavobacterium litorale: K1I41_10245
Entry
K1I41_10245       CDS       T08396                                 
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
flo  Flavobacterium litorale
Pathway
flo03030  DNA replication
flo03430  Mismatch repair
flo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:flo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    K1I41_10245 (dnaX)
   03430 Mismatch repair
    K1I41_10245 (dnaX)
   03440 Homologous recombination
    K1I41_10245 (dnaX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:flo03032]
    K1I41_10245 (dnaX)
   03400 DNA repair and recombination proteins [BR:flo03400]
    K1I41_10245 (dnaX)
Enzymes [BR:flo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     K1I41_10245 (dnaX)
DNA replication proteins [BR:flo03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     K1I41_10245 (dnaX)
DNA repair and recombination proteins [BR:flo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     K1I41_10245 (dnaX)
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA DNAX_ATPase_lid AAA_22 AAA_14 RuvB_N AAA_5 AAA_30 nSTAND3 ResIII AAA_16 RCF1-5-like_lid DNA_pol3_gamma3 DNA_pol3_delta_C TIP49 Rad17 AAA_7 AAA_24 NTPase_1 DEAD AAA_19 DUF815 RNA_helicase AAA_assoc_2 AAA_18 NACHT IstB_IS21 Mg_chelatase NPHP3_N GNAT_acetyltr_2 AAA_28 Viral_helicase1 Sigma54_activ_2 TsaE dNK AAA_2 ORC-CDC6-like SRP54 ABC_tran KAP_NTPase CbiA APS_kinase AAA_11 DUF7486 T2SSE DUF1778
Other DBs
NCBI-ProteinID: QYJ67913
LinkDB
Position
2248889..2249974
AA seq 361 aa
MEQFIVSARKYRPQTFKDVVGQQAITNTLLNAIENNHLAQALLFTGPRGVGKTTCARILA
RKINQEGYDDPNEDFTFNVFELDAASNNSVDDIRNLIDQVRIPPQTGKYKVYIIDEVHML
SQAAFNAFLKTLEEPPKHAIFILATTEKHKIIPTILSRCQIFDFKRITVKDAKEHLAEVA
KSQGITFEDDALHIIAQKADGAMRDALSIFDRVVSYCGTNLTRQAVTENLNVLDYEYYIK
VTDLLLQNNIPELLLSFNDILAKGFDAHHFIAGLASHFRDLLVCKNPATLVLLEVGEVAQ
QLYGSQAQNASQEFLLEGITIANDCDLKYKNSQNQRLLVELCLMQLASITFDGEKKKLNH
L
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggaacaatttattgtatcagctcgtaaataccgcccacaaacctttaaagatgttgtg
gggcagcaagctattaccaataccttgttaaacgctatagaaaacaatcatttagcacaa
gccctactctttacaggacctcgtggcgtaggtaaaactacttgtgcacgtattttagca
cgtaaaataaaccaagaggggtacgacgaccctaacgaagattttacgtttaatgtgttt
gagctagatgcagcatccaacaactcggtagacgatattcgtaatcttatcgatcaagta
cgcataccaccccaaacaggtaagtataaagtatatattatagatgaagtgcacatgctc
tcgcaagccgcctttaatgcttttttaaaaacattagaagagccaccaaagcatgctata
tttatactggctaccacagagaagcataaaataatccccaccatattatcgcgctgccaa
atattcgattttaagcgaataaccgtaaaagatgctaaagagcatttggcagaagtagcc
aaaagccaaggtattacgtttgaggacgatgctttgcatattatagcgcaaaaagcagat
ggtgccatgcgcgatgcgctatctatatttgatagagtagttagctattgcggtaccaac
ttaacgcgccaagcggttactgagaaccttaatgtattagattacgaatactatattaaa
gtaaccgatttactactacaaaataacatccctgagttattattatcatttaatgatata
ctggcaaaaggttttgatgcacatcattttatagcagggcttgcctcccacttccgtgat
ttgttagtttgtaaaaatcctgcaacactcgttttactagaggttggcgaagtagcacag
cagctatatggttcacaagcacaaaacgcaagtcaggaatttttgttagaaggtattacc
attgctaacgattgcgatttgaaatataaaaatagccaaaatcagcgattactcgttgaa
ctttgcctcatgcagctcgcctctatcacttttgatggagaaaaaaaaaagctgaatcat
ttataa

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