Flavobacterium litorale: K1I41_10965
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Entry
K1I41_10965 CDS
T08396
Name
(GenBank) GIY-YIG nuclease family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
flo
Flavobacterium litorale
Pathway
flo03030
DNA replication
flo03430
Mismatch repair
flo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
flo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K1I41_10965
03430 Mismatch repair
K1I41_10965
03440 Homologous recombination
K1I41_10965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
flo03032
]
K1I41_10965
03400 DNA repair and recombination proteins [BR:
flo03400
]
K1I41_10965
Enzymes [BR:
flo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K1I41_10965
DNA replication proteins [BR:
flo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K1I41_10965
DNA repair and recombination proteins [BR:
flo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K1I41_10965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
DNA_pol_A_exo1
RNase_H_2
GIY_YIG_2
Rv2179c-like
T5orf172
Motif
Other DBs
NCBI-ProteinID:
QYJ68041
UniProt:
A0ABX8V5D7
LinkDB
All DBs
Position
2402944..2404308
Genome browser
AA seq
454 aa
AA seq
DB search
MYAILDIETTGGQYNEEGITEIAIYKYDGHEVIDQFISLVNPEKPIQPFVVKLTGINNAM
LQSAPKFYDIAKRIVEITEGCIIVAHNAQFDYRILRTEFERLGYKYERQSLCTVELSQKL
MPEQKSHSLGKLVRALGIPMSDRHRATGDALATVQLFKMLLAKDVEKEIIKSLIKSNKKL
DIQPKLFDLLTDIPSITGLYYMYKENGDLIYIGKSNNIKKRLNQHFTSTARKAKRLQRDV
FTISYEETGSELIALLKECQEIKVNKPSQNRALKRTVFPCSLYAEKNEDGYLCLAVKKTD
GRKKEILSFTSTNEAKNILFKITDKYKLCQKLSGLDSSAKSTCFPYKMGECYGACAGGEP
PTEYNKRVTEFINYNSFNHQNMIIIDKGRAVDERSAVLIEKGVYKGYAFFNLNYQVTNPD
VLKNILVPMEHNRDIKNIIQGYIRRKRALKIIRF
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcaatacttgatatagaaaccacaggaggacaatataatgaggagggtataacg
gaaattgccatttataagtatgacgggcacgaagtaatagaccaatttataagccttgtt
aaccccgaaaaacccatacaaccttttgtggtaaaacttacaggcattaacaatgccatg
ctgcaaagtgctcccaaattttacgatatagcaaaacgcattgtagaaattactgagggc
tgcattattgtggcacataatgcacagtttgactacagaatactccgtaccgagtttgaa
cgattgggctataagtacgaaaggcaatcgctttgtaccgtagagttatcgcaaaaacta
atgcccgagcaaaaatcacacagtctaggtaaattggttcgtgcgctaggcatacccatg
agcgacaggcatcgtgccacgggtgatgcattagctacagtacaactctttaaaatgcta
ttggctaaagatgttgaaaaagaaattataaaaagcctcataaaatcaaataaaaaactc
gatatacaacctaaactttttgatttattaactgatattccgtcgattactggattgtac
tatatgtataaagaaaatggcgatctaatatacatcggtaagagtaataacattaaaaaa
aggctcaaccagcactttaccagtacagcccgaaaagcaaaacggctgcaacgcgatgta
tttaccataagttacgaggaaacaggtagcgagcttatagctttgcttaaagagtgccaa
gaaattaaagttaataaaccatcgcaaaaccgcgctttaaaaagaactgtttttccatgc
tcgttatatgccgagaaaaacgaggatgggtatttatgccttgcggttaaaaaaacagat
gggcgcaaaaaagagattttatcatttactagtactaacgaggcaaaaaatatcttgttt
aaaataacagataagtacaagctgtgccaaaagttgagtggattggatagtagtgcaaaa
tcaacatgctttccgtacaaaatgggcgaatgttacggtgcttgcgcaggtggcgaacca
ccaacagagtacaacaaacgtgttactgagtttattaactacaacagttttaatcatcaa
aacatgattattattgataaaggcagagcggtagatgaacgtagcgcagtactgatagaa
aaaggcgtttacaaaggctatgcattctttaatcttaattatcaagtaaccaatcctgat
gtattaaaaaatattcttgttccgatggagcataacagagacataaaaaacatcatacaa
ggctacatccgaagaaaacgagccttaaaaataatacgattctaa
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