Ferruginibacter lapsinanis: LK994_01745
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Entry
LK994_01745 CDS
T07839
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
flp
Ferruginibacter lapsinanis
Pathway
flp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
flp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LK994_01745 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
flp03400
]
LK994_01745 (uvrA)
DNA repair and recombination proteins [BR:
flp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LK994_01745 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LK994_01745 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
RsgA_GTPase
AAA_29
nSTAND1
AAA_16
AAA_21
DnaJ_CXXCXGXG
nSTAND3
ATPase_2
AAA_14
Viral_helicase1
AAA_33
AAA_22
AAA_18
AAA_23
cobW
NMDAR2_C
T2SSE
Med16_bridge
CA109-like
Motif
Other DBs
NCBI-ProteinID:
UEG50196
LinkDB
All DBs
Position
408245..411112
Genome browser
AA seq
955 aa
AA seq
DB search
MARAKKNAEEEIIHNDFIEVFGAREHNLKNIDINIPKNKLVVFTGVSGSGKSSLAFDTIY
NEGQRRYMESFSAYARQFMGDMERPDVDKITGLSPVISIEQKTTNKNPRSTVGTITEIYD
FLRLLYARVGEAYSYNTGKRMVKFSEEEIVNNIYKKFDGKKISLLAPLVRGRKGHYRELF
EDVRKKGFVKVRIDGEVKDLTPKMQVDRYQIHDIELVIDRLPVNDDMKLRLSQSVVKTLQ
MGKDLMFVLVEGIDKPVQFSKMLMCDETGISYEEPSPNAFSFNSPYGACPTCKGLGNVYT
IDMESVLPDSAKSVKEGAIIPLGEERDASVFQQVVAFAKKHKINLDKPLKDLPKAQVDLL
LYGDQEINPALEMDLSDDTVPMEYTGSYEGIIPMLKRWFSSPQSNEALREWVEKFMTLKT
CATCNGARLRKESLWFKIDKRNITELSNLNLDNLAAWFDGIELRLSDKQNAIAKDVLKEI
RERLQFLLDVGLTYLTLNRSSKSLSGGESQRIRLATQIGSQLQGITYILDEPSIGLHQRD
NQRLISALQNLRDIGNSVLVVEHDKDIMMAADYLVDIGPKAGKHGGEIVAMGTPQEVLDS
RSDTALYLSGEKSIEVPKERRKGNGKFIELNGVKGNNLQNISVQFPLGKLIVVTGVSGSG
KSTLINETLYPLLNKFCYNSKANPLEYKSIKGLEQIDKVIEIDQSPIGRTPRSNPATYCG
FFTDIRTLFAAVPEAKIRGYNAGRFSFNVKSGRCDVCEGGGMRVIEMNFLPDVYVHCEKC
NGRRYNRETLEIRYKGKSISDVLDMTVDEAVEFFQAVPYIYRKIKVLQEVGLGYITLGQS
AVTLSGGEAQRVKLSTELGKKDTGKTFYILDEPTTGLHFQDIQHLLEVLTKLVDRGNTVL
VIEHNMDVIKVADHIIDIGPEGGDGGGLVLFEGVPEDLVKVEKSFTGKYLKAELK
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atggcaagagcaaaaaaaaacgctgaagaggagataatccacaacgattttattgaagta
ttcggtgcaagagaacacaatctcaagaacattgacatcaacattcctaaaaataaatta
gtggtgtttaccggtgtaagtggcagcggaaaatcttcattggcatttgatactatatac
aatgaaggtcagcgtaggtacatggaaagtttcagcgcctatgccaggcagtttatgggt
gatatggaacgtccggatgtagataaaataaccggcttatctccagtaatttctatcgaa
caaaaaacaaccaacaaaaatccacgtagtaccgttggtaccattacagagatatatgat
ttccttcgtttgctatatgccagggttggcgaggcttacagttacaacaccggaaaaaga
atggtgaagttcagcgaagaagaaattgtaaataatatttacaaaaaatttgatggcaaa
aaaataagtttgttagcaccactggtaaggggaagaaagggacattacagagagttattt
gaagatgtaagaaaaaaaggatttgtaaaagttagaattgacggcgaggtaaaagacctc
acgcctaaaatgcaggttgaccgttatcagatacatgatattgaattagtgatagaccgg
ttaccggtaaatgatgatatgaaacttcggctgagccagagtgttgtaaagactttacaa
atgggtaaagacctgatgtttgttttagtggaaggaattgacaagccggtgcaattcagc
aagatgttgatgtgtgatgaaacgggtatcagctatgaagagccatctcctaatgctttc
tcgttcaacagcccttatggcgcctgccctacctgtaagggtttaggcaatgtatacacc
atcgatatggaatctgttttgcccgacagtgcaaaaagtgtaaaagaaggcgccatcata
ccactaggtgaagaaagagatgccagtgtatttcaacaggtggttgcatttgcaaaaaaa
cataaaataaatttagacaagccgctaaaggatctgccgaaagctcaagtcgacctgctt
ttatatggcgaccaggaaattaatcctgcattagaaatggacctgagtgatgatactgtt
ccgatggaatacacgggaagttatgaaggcatcataccaatgctgaagcgttggttctct
tctccgcaaagcaatgaagcattgcgtgagtgggtagaaaaattcatgacattaaaaacc
tgtgctacctgcaatggtgccagattaagaaaggaaagcctttggtttaaaatagataaa
agaaatatcacagaactcagcaacttgaatttagacaatctggcggcatggttcgacggc
atcgaattacgtttaagtgataaacaaaatgcgatcgctaaagatgtattgaaagagata
agagagcgtttgcaatttttattagatgtaggacttacttatctcaccttaaacagatct
tctaaaagccttagtggtggagaatctcagcgtatccgactggcaacacaaataggatca
caattacaaggcatcacgtatatcttagatgaaccgagtattggtttgcatcaaagagac
aatcagcgattgatcagtgcattgcaaaacttaagagatatcggaaacagtgtattggta
gtagaacatgataaagatattatgatggctgctgattacctcgttgacatcggtcccaaa
gccggcaagcatggcggagaaattgtggcaatgggtacaccacaggaagtactcgattca
agatcagatactgcactttatttaagcggcgaaaaaagtattgaggtccctaaagaaaga
agaaaaggaaacggaaaattcattgaactgaatggggtgaaaggcaataatcttcaaaat
atttctgtacaatttcctttaggaaaattaattgttgttaccggtgtaagcggcagtggt
aaatcaactttgatcaatgaaacattgtatcccctgctgaataaattttgttacaactca
aaagccaatccgctggaatataaatccatcaagggtttagagcagatagacaaggtgatt
gagatagatcaatctccgatcggtcgtacaccaagaagcaaccctgctacttactgtggt
ttttttacagacataagaacattatttgcagcagtacccgaagcaaagatccgtggttat
aatgcaggtcgtttttcttttaatgtaaaaagcggcaggtgtgatgtttgtgaaggcggt
ggcatgagggtgattgaaatgaattttttaccggatgtatatgtgcattgtgaaaaatgt
aatggcagacgttacaacagagaaacacttgaaataagatacaaaggaaaaagcatcagc
gatgtattggacatgactgttgatgaagcggtagaattttttcaggcagtgccctatatc
taccgaaaaataaaagtattacaggaagttggtttaggttacatcacattaggccaaagt
gctgtaacccttagtggtggtgaagcacagcgtgtaaaactttctacggagttaggaaaa
aaagataccggaaaaacattttacattttagatgaacctactaccggcttgcattttcag
gatatccaacatctgttggaagtattgaccaaattagttgacagaggcaataccgtattg
gtgatcgaacataatatggatgtaataaaagtggcggatcatatcattgatatcggaccg
gaaggtggcgatggcggtggattggtattatttgaaggcgttcctgaagacctggtaaaa
gttgaaaaaagttttaccggaaaatatcttaaggcagaattgaaataa
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