Ferruginibacter lapsinanis: LK994_04095
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Entry
LK994_04095 CDS
T07839
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
flp
Ferruginibacter lapsinanis
Pathway
flp02020
Two-component system
flp02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
flp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LK994_04095 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LK994_04095 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
flp03021
]
LK994_04095 (rpoN)
Transcription machinery [BR:
flp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LK994_04095 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
HTH_12
MarR
HTH_IclR
LacI
SF3b1
CTD6
NES_C_h
Motif
Other DBs
NCBI-ProteinID:
UEG50652
LinkDB
All DBs
Position
946904..948391
Genome browser
AA seq
495 aa
AA seq
DB search
MALSQGLYQKQLQKLSPQQIQLMKLLQVPTALLEERIKEELEENPALETGEEETEEFEND
TTEEFETEGEDEFDLDGSSDEYDNIDISEYVQDGDDDIADYRMKDENYPEMDDGKTIPHK
VETGFNELMLEQLGMLNLDEHRHKVAEQIIGNLDDDGYLRREISAIVDDLAFRQNIQTTE
EEVGELVAEIQQFDPAGVAARNLQECLLLQLERKIDDGEHVEMAIKVLEKYFEEFTKKHY
EKIQRGLNITDDQLRGIINQIIKLSPKPAGNIGEGNKNEGYIIPDFFILNNAGKLELTLN
SRNAPDLRISEGYRDMLKDYDKGTKKDKRQKEAVLFIKQKIDSAKWFIDAIKQRQHTLLS
TMGAIMDYQYEFFVTGDETEMRPMILKDIAEKTNLDISTVSRVANSKFVQTEFGTYRLKF
FFSESLQTDSGEEVSTREVKKILSDLIEAESKKHPLSDERLTELLQEKGYNIARRTVAKY
REQLNVPVARLRKEL
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggccttaagtcagggattatatcaaaaacaattacagaaattatctccgcaacaaatt
cagttgatgaaattgttgcaggtacctactgccttgctggaagaaaggatcaaagaagaa
ctggaagagaacccggcactggaaacaggcgaagaagaaaccgaagagtttgaaaatgat
actaccgaagagtttgaaacagagggagaagacgaatttgatctggatggaagctcggat
gaatacgacaatatagatatcagcgaatatgtacaggatggtgacgatgatattgccgat
tacagaatgaaggatgaaaattatcctgaaatggatgatggtaaaactattccacataaa
gtggagaccggttttaatgaattgatgctggaacaattgggcatgttaaatctggatgaa
catcgtcataaagtagctgaacaaattatcggaaacctggatgatgatggttatttacgt
agagaaataagtgctatagtggatgacctggcattcagacaaaatatacaaaccactgaa
gaagaagtgggtgaactggtagcagagatacagcaatttgaccccgccggtgtggctgcc
agaaatttacaggagtgtttattactacaactggaaagaaagatagacgatggcgaacat
gtagaaatggccatcaaagtattggaaaaatactttgaggaatttacaaaaaagcactac
gaaaaaattcaacgtgggttaaatattactgacgaccagttaagaggcattatcaaccag
ataattaagttgagccctaagccagcaggtaatattggtgaaggcaataagaatgaaggt
tatatcattccggatttctttattttgaataatgccggtaagttagaacttaccttaaac
agcagaaacgctccagacctgcgcatcagcgaaggttacagagatatgctgaaagattat
gacaagggcaccaaaaaagataagcgacaaaaggaagctgtacttttcatcaagcaaaag
atcgattctgctaaatggttcattgacgctatcaagcaaaggcaacatacgttattaagc
acaatgggtgctattatggattatcagtatgaattttttgttacaggggacgaaactgaa
atgcgcccgatgatcttaaaagatattgcggaaaaaaccaacctggatatcagcacggta
agccgtgtagctaacagtaaatttgtgcaaacagaatttggtacttacagactaaaattc
ttcttcagtgaaagtttacagaccgacagtggcgaagaagtgagtaccagggaggtaaaa
aagatactaagcgaccttattgaagcagaaagtaaaaaacatcctttaagtgatgaaaga
ttaacggagttactgcaggaaaagggttataacattgcaagaagaaccgttgccaaatac
agagaacaattaaatgtaccggtggcaagattaagaaaagaattatga
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