Ferruginibacter lapsinanis: LK994_05410
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Entry
LK994_05410 CDS
T07839
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
flp
Ferruginibacter lapsinanis
Pathway
flp03030
DNA replication
flp03410
Base excision repair
flp03420
Nucleotide excision repair
flp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
flp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LK994_05410 (polA)
03410 Base excision repair
LK994_05410 (polA)
03420 Nucleotide excision repair
LK994_05410 (polA)
03440 Homologous recombination
LK994_05410 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
flp03032
]
LK994_05410 (polA)
03400 DNA repair and recombination proteins [BR:
flp03400
]
LK994_05410 (polA)
Enzymes [BR:
flp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LK994_05410 (polA)
DNA replication proteins [BR:
flp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LK994_05410 (polA)
DNA repair and recombination proteins [BR:
flp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LK994_05410 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LK994_05410 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_2
HHH_5
DUF3913
HHH
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
UEG50910
LinkDB
All DBs
Position
complement(1230609..1233467)
Genome browser
AA seq
952 aa
AA seq
DB search
MQKKLFLLDAFALVFRAYYALIRTPRVTSKGKNTNAQFGFTNTLVDLIKNQKPTHMAVCF
DTSAATERHTDFADYKANRQETPEDISLAVPDIKRIIEALNIPVIAIDGYEADDVIGALA
KQAEKAGYEVFMVTPDKDYGQLVTENIKIYKPPYQGNTHEILGPKEVCEKWDIENVSQVI
DILGLMGDSVDNIPGIPGVGEKTAAKLLKEYGTLENILDNAANIKGKLGEKVAAGKELAL
MSKKLATIITDIPAAEFHEENFRIKEMNKEALKEVFGELEFRTLGKRLLGEEIGIATADN
GQQAIEKAKAVPAQMDLFGNIIEAPAPTPSASNSSENESEEDHFAIEKNINNTPHEYILL
NDENSIKQFIKLAAQSTEICFDTETTGIDANDAELVGLSFSLKPGEAYYVPCPANQADCI
QLLNNFQQLFNNTAITWIGQNIKYDMLLLKWYGFELKGDIFDTMLAHYVIEPDGKRSMDA
LSEKYLGYETVHIDELIGKKGKNQGNMRDVEVEKIKDYAAEDADITLQLKNIFLPQLKTK
EVEKVFYQVENPLVKVLTDMEFEGIRIDEKFLNDYSKELEKEAKVAEESVYAQAGVRFNL
ASPKQLGEVLFDKMQIDPKAKKTKTGQYATGEDVLLKLASKNKIVDDILAFREYTKLKST
YVDALPLMINKKTGRVHTSYAQAVAVTGRLSSNNPNLQNIPVRTERGREIRKAFIPRDEN
FVLLSADYSQIELRIVAAISGDVNMCEAFRTGKDIHTATAAKVFNVDEKEVTKEMRYKAK
SVNFGIIYGQGAFGLAENLGITRAEAKEIIDNYKMQFPNIQKYMDDTINFARETGYVETL
MGRKRWLKDINSANFTVRGFAERNAINSPIQGSAADMIKLAMIKIHAAFKQRNFKSKMLL
QVHDELVFDAHKDEIEIIKPVILECMQTALKLPNDVPTDAEVGVGDNWLVAH
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaaaattatttctgttagatgcatttgcgcttgtttttagggcctactatgca
cttattcgtacaccacgtgttaccagcaaaggcaaaaacaccaatgcacaatttggcttt
accaatacattagttgatctgattaaaaatcaaaagcctacacatatggctgtttgtttt
gataccagcgctgccaccgaacgccatacagattttgcagattacaaagctaacagacaa
gaaacacctgaagatatttcactcgccgttcctgatatcaaaaggatcatagaagcatta
aacattcctgtaattgccatcgatggttacgaagccgatgatgtgattggcgcattggca
aaacaagcagagaaggcaggctacgaagtttttatggttacccccgataaagattatgga
caactggtaacagaaaacattaaaatttacaaaccgccttaccagggcaatacacacgaa
atacttgggccaaaagaggtttgtgaaaaatgggatattgaaaatgttagccaggtaata
gatattttaggattgatgggtgatagtgttgataatatccccggcattcccggtgttggc
gaaaaaacggctgctaaattgttgaaagagtatgggacattagaaaatattttagacaat
gctgctaacataaaaggtaaactcggcgaaaaagttgctgccggtaaagagctggcattg
atgagtaaaaagttagctaccatcatcaccgatattcctgcagctgaatttcatgaagaa
aatttcaggataaaggaaatgaataaagaggcgctgaaagaagttttcggtgaactggaa
ttcagaacattaggcaaaagattattgggtgaagaaattggaatagctacggctgacaat
gggcaacaggcaatagaaaaagctaaagctgtgccagctcaaatggacctgtttggaaac
ataattgaagcacctgccccaacaccatctgccagtaattcttctgaaaatgaatcagaa
gaagatcactttgctatagaaaaaaatatcaacaatactccacacgaatatattttattg
aacgatgaaaattcaataaaacaattcataaagctggccgctcaatcaactgaaatttgc
tttgacaccgaaacaaccggcatagatgctaacgatgcagagttggtaggattaagtttt
tctcttaaacccggcgaagcatactatgttccatgccctgcaaatcaggcagactgcatt
caacttttaaacaactttcaacaactgttcaacaatactgcaataacatggataggccaa
aatatcaaatatgatatgctgctattgaaatggtatggctttgaattgaaaggagacatt
tttgatacgatgctggcacattacgtgattgaacctgatggcaaaagaagtatggatgca
ttgagtgaaaaatatttaggttacgaaaccgtacacatcgacgaacttatcggaaagaaa
ggaaagaatcagggtaatatgagagatgtggaagttgaaaagataaaagattatgccgcc
gaggatgctgatatcactttacaattaaaaaatatttttcttccccaactaaaaacaaaa
gaagtagaaaaagttttttaccaggtagagaacccattggtgaaggttttgaccgacatg
gagtttgagggcatccgaattgatgaaaaatttctgaacgattatagcaaggaactcgaa
aaagaagcgaaagttgcagaagaaagcgtatacgctcaggcgggagttcgttttaatttg
gcaagccctaaacaattaggagaagtcttatttgataaaatgcaaattgatcctaaagct
aaaaaaaccaaaaccggtcaatatgcaacaggtgaagatgtattattaaaattggccagc
aagaataaaattgtagatgatattttagccttcagagaatacactaaattaaaatcaact
tatgtagatgcactaccgttgatgatcaataaaaaaaccggcagggtgcataccagttac
gcacaagctgttgctgtaaccggcagacttagcagcaacaatcctaatctgcaaaatatt
ccggtacgaactgaaagaggcagagagatcagaaaagcatttataccaagagatgaaaat
tttgttctactaagtgccgattattctcaaattgaattacgcatcgtggcggctattagt
ggcgatgtaaatatgtgtgaagcattcagaaccggaaaagatattcataccgctacggct
gccaaagtatttaacgtagatgaaaaagaagtgaccaaagaaatgcgctacaaagccaaa
agtgtaaacttcggcatcatctatggacaaggcgcatttggcttagcagaaaatttaggt
atcacaagagcagaagctaaagagatcatcgataattataaaatgcaattccccaacatc
cagaaatatatggatgacaccatcaacttcgccagggaaaccggctatgttgaaactttg
atgggacgtaagcgttggttgaaagacatcaattctgccaactttaccgtacgtggtttt
gcagaacgtaatgctatcaactctcctattcaaggctctgcagctgatatgatcaagttg
gccatgataaaaattcatgcagcgttcaaacaacgcaattttaaaagcaaaatgctattg
caggtacatgacgaattagtgtttgatgcacataaagatgaaatagaaattattaagcct
gttattttagaatgtatgcaaactgcattaaaattaccgaatgatgttcctacagatgcc
gaagtaggcgtcggagataattggttagttgctcattaa
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