Ferruginibacter lapsinanis: LK994_06450
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Entry
LK994_06450 CDS
T07839
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
flp
Ferruginibacter lapsinanis
Brite
KEGG Orthology (KO) [BR:
flp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
flp03032
]
LK994_06450 (gyrB)
03400 DNA repair and recombination proteins [BR:
flp03400
]
LK994_06450 (gyrB)
Enzymes [BR:
flp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LK994_06450 (gyrB)
DNA replication proteins [BR:
flp03032
]
Prokaryotic type
DNA Topoisomerases
LK994_06450 (gyrB)
DNA repair and recombination proteins [BR:
flp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LK994_06450 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
UEG51112
LinkDB
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Position
1468332..1470311
Genome browser
AA seq
659 aa
AA seq
DB search
MSTEIEEVIAPSNGSYGADSIQVLEGLEAVRKRPAMYIGDIGVKGLHHLVYEVVDNSIDE
ALAGHCKNISVTINEDNSITVEDDGRGIPTAMHTKEKKSALEVVMTVLHAGGKFDKDSYK
VSGGLHGVGVSCVNALSSKLHVTVNRDGKRFEQEYAIGVPQYPVREIGNSDTHGTRVQFW
PDLTIFTSGVYNREILEGRLRELSFLNRKITIHISDLREKDDDGKTYSKTFYSEGGIVEF
VEMLDKNANRQTLLPTVIYCEGRDEATNVAVEVAMLYNTGYQEHLFSYVNNINTIEGGTH
VAGFRRSITRVFKSYGEKEGMFEKAKVEIEGDDFREGLSAIISVKVPEPQFEGQTKTKLG
NSEVMGVVDTTLSRVLTAFLEENPKDAKTIIQKVILAAQARAAAKKAREMVQRKSVLTGG
GLPGKLADCSDKDPHRCELYLVEGDSAGGTAKQGRDRSYQAILPLRGKILNVEKAMEHKI
YDNEEIRNMFTALGVKIGTPEDPKALDTSKLRYHKLIIMTDADVDGSHIATLILTFIFRY
MQAMVEQGFVYIAQPPLYLVKKGKDQDYAWTDEERKALIAKFGQGKDDSVTTQRYKGLGE
MNAEQLWETTMNPATRTLKQVTIESAAEADRVFSMLMGDEVPPRREFIETHAKYAKIDV
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgagtacagaaattgaagaagtaatagctccgtcaaatggtagttatggagcagacagt
atccaggttttagaaggtttagaagcagtacggaaacgtcctgcaatgtatatcggagat
atcggtgtaaaagggttgcatcacctggtatatgaagtggtagataactcgatcgatgag
gcattagccggccattgtaaaaatatttcagttaccatcaatgaagacaattccatcacg
gtagaagatgatggtcgtggtatacctaccgccatgcacaccaaagaaaaaaagagtgca
ttagaggtggtaatgaccgtgttgcatgccggtggtaaattcgataaagattcttacaaa
gtatcgggtggtttgcatggtgtgggggtaagttgcgtaaatgcattaagctctaaactg
catgtaaccgtaaacagagacggtaaaagatttgaacaggagtatgctatcggcgtacct
caatatccggtaagagaaataggtaattctgatacacatggtaccagggtgcagttctgg
cctgatttgaccatcttcacctcgggggtatacaatcgtgaaattttagaaggtcgttta
cgtgagttatctttcttaaacagaaagataaccattcatatcagtgatctgagagaaaaa
gatgatgatggtaaaacatacagcaaaactttttacagcgaaggcggtatcgttgagttt
gtagaaatgctggataaaaatgccaatcgtcaaaccttattacctaccgtaatttattgc
gaaggaagagatgaagcaaccaatgttgcagtggaagtggcgatgttgtacaacacgggc
tatcaggaacatctgttcagctatgtaaataatatcaacaccattgaaggtggtacgcat
gtggcgggcttccgtcgttctattaccagggtatttaaaagctatggtgaaaaagaaggc
atgtttgaaaaagccaaagtagaaattgaaggagatgatttcagagaaggattgagtgcg
atcatttctgtgaaagtacctgagccgcaatttgaaggacaaacaaaaacaaaattaggt
aacagtgaggtgatgggtgtggtagataccacattaagccgtgtattgaccgcatttttg
gaagaaaatccaaaagatgctaaaaccatcatccaaaaagtaatattagccgcacaggca
agagcagctgctaaaaaggcccgtgaaatggtacaacgtaagagtgtacttaccggcggc
ggtttaccgggtaaactggcagattgcagtgataaagatccacatcgttgtgagttatac
ctggtggaaggggattcggcaggtggtacggccaagcaaggcagagacagaagttaccag
gccattcttcctttacgtggtaaaattctgaacgtagaaaaagcaatggaacataagatc
tacgacaatgaagagatcagaaatatgttcactgcactgggtgtaaaaattggcacaccg
gaagatccgaaagcactagatacctccaaactgcgttatcataaactgatcatcatgacg
gatgccgatgtggatggtagtcatattgccacattgatattgacctttattttccgttat
atgcaggcaatggtagagcaaggctttgtatatattgcccagccgcctttataccttgtt
aaaaaaggaaaggatcaggattatgcatggacagatgaagaacgtaaagcattgatcgct
aaattcggacaaggtaaggatgacagcgttacaacgcaacgttataaaggtttgggtgaa
atgaatgcagaacaattatgggaaactaccatgaaccctgctaccagaaccttgaaacaa
gttactatcgaaagtgctgcagaagctgacagagtatttagtatgctgatgggtgatgaa
gttcctccacgtagagagttcatcgaaacacatgcgaaatacgctaagatcgacgtttaa
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