Ferruginibacter lapsinanis: LK994_08020
Help
Entry
LK994_08020 CDS
T07839
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
flp
Ferruginibacter lapsinanis
Pathway
flp03410
Base excision repair
flp03430
Mismatch repair
flp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
flp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LK994_08020 (recJ)
03430 Mismatch repair
LK994_08020 (recJ)
03440 Homologous recombination
LK994_08020 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
flp03400
]
LK994_08020 (recJ)
DNA repair and recombination proteins [BR:
flp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LK994_08020 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LK994_08020 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LK994_08020 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Toprim
Motif
Other DBs
NCBI-ProteinID:
UEG48581
LinkDB
All DBs
Position
complement(1855274..1856980)
Genome browser
AA seq
568 aa
AA seq
DB search
MEKRWNLLQADNAKAIALHQSLKISKTLCKILVQRGIDDFDKAKSYFRPSLGQLHDPFLM
KDMHKAVERVKKAFVKKEKILVFGDYDVDGTTAVATMYQFICKIYDPANVEFYIPHRYRE
GYGVSKMGIDYAAENNFTLIISLDCGIKSADLIAYATTLGIDFIVCDHHLPDKELPKAVA
ILNPKQADCNYPYKELCGCGVGFKLITALAQQYSIDEENYFCYLDLLAVAIAADIVPMTG
ENRILAYHGLAQINQQPCEGIKALIQLAGIEKKLSITNVVFVIAPRVNAAGRMDDAKKAV
QLFIEKDPIKALDYAEILHSDNSDRKEADSSITEEALKLIDTDEILINKKTTVVYKEHWH
KGVVGIVASRLTEKYYRPTVVLTRSGDIAAGSARSVVGYNLYEAIHACKEHLLGYGGHFA
AAGLSLLPENVEAFSKQFEEIVSSTIDPNLLIPEIIIDAETSFEEINAPLYNIICQMEPF
GPDNMRPVFLAKNVTDTGYSKIVKELHVRFVVKNHNKTLTGIGFNMADKFHIVEQQKPFD
IVFTIDENEWNGETTLQMKVIDIRPSKN
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaacgttggaatttactgcaggctgataatgctaaagcaattgcattacaccaa
tcattaaagatcagtaaaacactttgcaaaattttagtgcaacgtggtattgacgatttt
gataaagccaaatcatatttcaggccctcattaggtcagctacatgacccgtttttgatg
aaggatatgcacaaagctgttgaaagagtgaaaaaagcctttgtaaagaaggaaaaaata
ttggtttttggtgattacgatgttgatggcactacagcagtagcaactatgtaccagttt
atctgcaaaatatatgatccggctaatgtagagttctatatccctcacagatacagggaa
ggatatggcgttagtaaaatgggtattgactatgccgccgaaaacaatttcacactaatt
atctcattggattgcgggattaaatctgctgatctgattgcttatgctactacgctaggt
attgattttattgtttgcgaccatcatttaccggataaagaattacctaaagcagttgct
atattaaaccctaaacaagcggattgcaattacccatacaaggaactttgtggttgtgga
gtaggctttaaattgatcacagcattggcacaacagtatagtatagacgaagaaaactat
ttttgctatctcgatttgctggcagtagccatcgccgccgacattgtccctatgacaggc
gaaaacaggatactggcttaccatggtctggcccaaataaatcagcaaccatgtgaagga
ataaaagcactgatacagttagccggtatagaaaaaaagttatctatcactaatgtggtc
tttgttattgctccaagggtaaatgctgcaggaagaatggatgacgcaaaaaaagcagtg
caattatttatcgaaaaagatccgatcaaagccctggactatgcagagatcctgcatagt
gataacagcgatagaaaggaggcagacagcagtattacagaagaagcgctcaaattgatc
gacacagatgaaatcttaataaataaaaaaacaactgttgtttataaggagcattggcac
aaaggagtagtaggaatagtagccagcagattaaccgaaaaatattacagaccaacggta
gtgcttacacgaagtggagatattgctgcaggtagtgcccgtagtgtggttggctataat
ttatacgaagccatacatgcctgtaaagagcatttattgggatacggaggacatttcgct
gcagcgggcctttctttattacctgaaaatgtagaagcattcagtaagcaatttgaagaa
attgtaagcagcacaattgacccgaatttactgataccagaaataattattgatgcagag
acatcttttgaagaaataaatgcaccattgtataatattatttgtcaaatggaaccattt
ggccctgataatatgcgacccgtttttttagcaaaaaatgttactgatacaggatattca
aaaattgtaaaagaattacatgttcggtttgttgtaaagaaccataataaaacccttacc
ggtataggctttaatatggctgataaatttcacatcgttgaacaacaaaaaccatttgac
attgtatttacaatagatgaaaatgaatggaacggcgaaacaacattacaaatgaaggtc
attgatatcaggccgtcaaaaaattaa
DBGET
integrated database retrieval system
