Ferruginibacter lapsinanis: LK994_09885
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Entry
LK994_09885 CDS
T07839
Name
(GenBank) DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
flp
Ferruginibacter lapsinanis
Brite
KEGG Orthology (KO) [BR:
flp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
flp03400
]
LK994_09885
Enzymes [BR:
flp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
LK994_09885
DNA repair and recombination proteins [BR:
flp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
LK994_09885
Prokaryotic type
LK994_09885
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UEG48945
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Position
2312202..2313506
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AA seq
434 aa
AA seq
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MPTVNIFWFRRDLRLNDNAALYHALKDSHPVVPVFIFDRNILDKLEDKTDRRVAFIHAAI
IELQQELLAIGSAIEVYYGAPLEVYRALLSKYKINKVFANHDYEPYALEREKAIADLLQA
HGATLHTYKDQVIFEKDEVLKDDGKPYTVFTPYSKKWKATLKDFHLKAYPTEKYFSNFYK
QPVQEILLLQSMGFKEVGQLFPSKQLNEEIVKKYKEQRDFPGIDSTSKLGLHLRFGTVSI
RAVAEKGRALCETYLNELIWRDFYHMILWHFPQVGMGKAFKPEYDTIEWRRDQGEFEKWC
NGQTGYPIVDAGMRELNATGFMHNRVRMVVASFLTKHLLLDWRLGEAYFAQKLLDFDLAA
NNGGWQWAAGSGCDAAPYFRIFNPYLQTQKFDPQLTYIKKWVPEFQEFNYPKPIVEHELA
RNRCLEVYAMALKK
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgcccacagttaatattttctggttcaggagagatctgcgtttaaatgataatgcagca
ctataccatgctttaaaagatagccatccggttgttcctgtttttatatttgatagaaac
attctggataaactggaagataaaactgataggagagtagcatttatacatgctgctatc
attgagttgcagcaggagcttttggctattggttctgcaattgaagtgtattatggtgca
ccgctcgaagtataccgggcacttttatcaaaatacaagatcaataaggtctttgccaac
catgattatgaaccctatgctttggaaagggagaaggcaattgctgatttgttgcaggca
catggagccactttacatacctataaggatcaggttatatttgaaaaggatgaggtgctg
aaagatgatggtaagccgtatacagtttttaccccttatagtaaaaagtggaaagcgact
ttaaaagattttcatttgaaagcttatcctaccgaaaaatatttttcaaatttttataaa
cagccggtgcaagaaattttattattacagtcaatggggtttaaggaggttggccagctt
tttccttctaaacaattgaatgaagaaattgtaaaaaaatataaagaacaaagagatttt
cctggcatagacagcacatcgaaattaggattacacctgcgtttcggcactgtaagtatc
agggcagtagcagaaaagggaagagcgctgtgtgaaacgtatttaaatgaattgatctgg
agagatttctatcatatgatcctgtggcattttccacaagtaggaatgggaaaagctttt
aaacctgaatatgatactatagaatggcgaagagatcaaggagagtttgagaaatggtgt
aatggacaaacaggctatccgatcgttgatgctgggatgagagaattgaatgcaacaggg
tttatgcataatcgtgtacgcatggtagtggcatctttcttgactaagcatttattactt
gactggcgtttaggtgaagcctactttgcacaaaagctattggattttgatctggcagca
aataatggaggctggcaatgggctgcaggtagtggttgtgatgcagctccctatttcaga
atctttaatccttatttgcaaacacaaaaatttgacccacaattgacctatataaaaaaa
tgggtgccggaattccaggaattcaattacccaaaacctatagtagaacatgaattggca
agaaaccgttgtttggaagtatatgctatggcgctaaaaaaatga
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