KEGG   Ferruginibacter lapsinanis: LK994_14030
Entry
LK994_14030       CDS       T07839                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
flp  Ferruginibacter lapsinanis
Pathway
flp03030  DNA replication
flp03430  Mismatch repair
flp03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:flp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LK994_14030
   03430 Mismatch repair
    LK994_14030
   03440 Homologous recombination
    LK994_14030
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:flp03032]
    LK994_14030
   03400 DNA repair and recombination proteins [BR:flp03400]
    LK994_14030
Enzymes [BR:flp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LK994_14030
DNA replication proteins [BR:flp03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LK994_14030
DNA repair and recombination proteins [BR:flp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LK994_14030
SSDB
Motif
Pfam: RNase_T ExoX-like_C RNase_H_2 QSregVF_b
Other DBs
NCBI-ProteinID: UEG49755
LinkDB
Position
complement(3342451..3343224)
AA seq 257 aa
MSLQLSRPIAFIDLETTGVSLTADRIVEVAIIKILPDGTRQVKRKLINPLMPIPPQSTEI
HGITDEMVKDAPTFKQAGNELKQFIENCDLGGYNSNRFDIPMLMEEFLRAGLEMDLTTRR
MVDVQHIFYTMEPRTLTAAYKFYCQKELVDAHSAEADVDATIDVLLAQMDKYPQLGNTVD
SILNSIGEEKIVDYARRFIFDDKNVEVFNFGKHKGRPVADVLKAEPQYYDWMMRGDFPLH
TKQKLTEILNKTLLKNN
NT seq 774 nt   +upstreamnt  +downstreamnt
atgtccttacaactttcccgcccgattgcctttattgacctagaaaccacaggagttagc
cttacagcagatagaattgttgaagtggcaatcatcaaaatattacctgatggcacaagg
caggtaaaacgaaaactcatcaatccgttgatgcccattcccccgcaatcaacagaaatt
catggtataacagatgaaatggtgaaagatgcgcctacatttaagcaggcaggcaatgaa
ttgaagcagtttatagagaattgtgacctgggaggatataacagcaaccgttttgatatc
ccaatgttgatggaagagtttttaagagcaggattagaaatggatctgactaccaggaga
atggtagatgtgcaacatatcttttatacgatggagcctcgtacactgactgcagcctat
aaattttattgccaaaaagaattggtagatgcacatagtgccgaagctgatgtggatgct
actattgatgtactactggcgcaaatggataaatatccgcaactgggaaatacagtagat
tctattttaaattcgataggagaagagaaaatagttgactatgcccgaagatttattttt
gatgataagaatgtagaggtgttcaattttggtaaacataaaggcagaccagtggctgac
gttttaaaggctgagcctcaatattatgattggatgatgagaggtgattttcctctgcac
actaaacaaaaactcactgaaattttaaacaagacactgttaaaaaacaactaa

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