Ferruginibacter lapsinanis: LK994_14495
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Entry
LK994_14495 CDS
T07839
Name
(GenBank) GIY-YIG nuclease family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
flp
Ferruginibacter lapsinanis
Pathway
flp03030
DNA replication
flp03430
Mismatch repair
flp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
flp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LK994_14495
03430 Mismatch repair
LK994_14495
03440 Homologous recombination
LK994_14495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
flp03032
]
LK994_14495
03400 DNA repair and recombination proteins [BR:
flp03400
]
LK994_14495
Enzymes [BR:
flp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LK994_14495
DNA replication proteins [BR:
flp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LK994_14495
DNA repair and recombination proteins [BR:
flp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LK994_14495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
DUF7508
DUF123
RNase_H_2
GAT
Motif
Other DBs
NCBI-ProteinID:
UEG49847
LinkDB
All DBs
Position
complement(3446404..3447744)
Genome browser
AA seq
446 aa
AA seq
DB search
MYAIVDIETTGGYASANGITEIAVYVHDGTRVVKHFETLINPQQKIPYHITTLTGIDNAM
VAEAPAFHEIAETLYEVLKDNIFVAHSVNFDYSFVNHQLKANGFVLSPRKLCTVRLARKV
VPDLKSYSLGNLCRQLQIPISNRHRAGGDAKATVLLLEHLLANNAQPHIDQMLKKTSGEQ
WLPPGLQKSDITKLPASPGVYYFHNIKGKIIYVGKAVNIKKRVSSHFTVNDAERKRQNFL
LHVCKISFKECATELEAIVLESAEIKRLWPKYNKSQKQPLQKYALYTFEDSMGYMRLAID
KKRKNIPALYYFNSLHEGIILLRKMLEEFELNEKLCFLNKMSFTEEDKELAGTVKSYNKK
IIKAMAALNKRLPTFAVLDDGKQANEKLCLLIEKGCFWGMGYLPASLSIESVDDLKEFLQ
PYQDNDTIRNSIYSFVEAYPEKKLVF
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcgatcgtagatattgaaacaaccggcggctatgcttctgcaaacggcattacc
gaaattgcggtgtatgtgcatgatggaacaagagtggtaaagcattttgaaacgttgatc
aatccgcaacaaaaaataccttaccatattactacattaactggtatcgataatgcgatg
gtggcggaagcgccggcatttcatgaaatagcagaaacattatatgaagtattaaaggac
aatatttttgtagcgcacagtgtaaattttgattactcttttgtcaaccaccagttaaag
gcaaatggttttgtgttatctccccgaaaattgtgtaccgtacgtctggcccgaaaagtg
gtgcctgatctgaagtcatatagtttaggaaatttatgccgacaattacaaatacctatc
agcaatcgtcatagagcaggtggtgatgcaaaagcaacggtgttattattagaacatttg
ttggctaataatgcacaaccgcatattgatcagatgttgaagaaaacttccggcgaacaa
tggttgccacccgggttacaaaaatcggatatcacaaaattaccggcatctcctggagtc
tattattttcacaatataaaaggtaaaataatttatgtaggcaaggcggtgaatattaag
aaaagagtgagcagtcattttacagtgaatgatgctgaaagaaagcggcagaatttttta
ttgcatgtttgtaaaataagttttaaagaatgtgcaacagagttagaggccatcgtattg
gaaagtgcggagataaagcgtttgtggcctaagtataataaaagtcagaaacaacctttg
cagaaatatgcattgtatacgtttgaggatagtatgggatatatgcgtttagcgattgat
aagaagagaaaaaatataccggcattgtattatttcaattctctgcacgaaggcatcata
ttattgagaaagatgctggaagaatttgaactcaatgaaaaactttgttttttaaataag
atgtcttttactgaggaggataaggagttagcaggtactgtaaaatcatataataaaaaa
attattaaggcaatggctgcattgaataagcgattaccaacatttgctgtactggatgat
gggaagcaggcaaacgaaaaattgtgtttattgatcgagaaaggatgcttttgggggatg
gggtatttaccagcatctctatcaattgagtctgttgatgatctgaaagaatttttacaa
ccttatcaggataatgataccatacggaatagtatttattcttttgtagaggcgtatccg
gagaagaagttggtgttttaa
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