Flavobacterium sp. CFS9: CFS9_23970
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Entry
CFS9_23970 CDS
T11517
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
flq Flavobacterium sp. CFS9
Pathway
flq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
flq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CFS9_23970 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
flq03019
]
CFS9_23970 (groL)
03110 Chaperones and folding catalysts [BR:
flq03110
]
CFS9_23970 (groL)
03029 Mitochondrial biogenesis [BR:
flq03029
]
CFS9_23970 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
flq04147
]
CFS9_23970 (groL)
Enzymes [BR:
flq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CFS9_23970 (groL)
Messenger RNA biogenesis [BR:
flq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CFS9_23970 (groL)
Chaperones and folding catalysts [BR:
flq03110
]
Heat shock proteins
HSP60 / Chaperonin
CFS9_23970 (groL)
Mitochondrial biogenesis [BR:
flq03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CFS9_23970 (groL)
Exosome [BR:
flq04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CFS9_23970 (groL)
Exosomal proteins of other body fluids (saliva and urine)
CFS9_23970 (groL)
Exosomal proteins of breast cancer cells
CFS9_23970 (groL)
Exosomal proteins of colorectal cancer cells
CFS9_23970 (groL)
Exosomal proteins of bladder cancer cells
CFS9_23970 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Pho88
Motif
Other DBs
NCBI-ProteinID:
BFM43756
UniProt:
A0AAT9H2Q6
LinkDB
All DBs
Position
complement(2844685..2846316)
Genome browser
AA seq
543 aa
AA seq
DB search
MAKDIKFDIEARDGLKRGVDALANAVKVTLGPKGRNVIIGKSFGGPTVTKDGVSVAKEIE
LKDPLENMGAQMVKEVASKTNDLAGDGTTTATVLAQAIVKEGLKNVAAGANPMDLKRGID
KAVESIVADLAKQAKVVGSDSDKIKQIASISANNDEVIGELIATAFAKVGKEGVITVEEA
KGTDTFVDVVEGMQFDRGYLSPYFVTNPEKMEVELDAPYILLYDKKVSSLKELLPVLEPV
AQSGKPLLIIAEDVDGEALSTLVVNKLRGALKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEERGYTLENTTIDMLGNAKRVSIDKDNTTIVSGAGEADIIKNRVNQIKGQMETTTSDY
DKEKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALL
RAKAALADLKADNADEATGIQIVSRAVESPLRTIVENAGLEGSVVVAKVGEGSGDFGYNA
KTDEYVDMLKAGIIDPKKVTRVALENAASVSGMILTTECALIDIKEENAGGGMPMGGGMP
GMM
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatataaaatttgatattgaagcacgtgacggattaaaacgtggtgttgat
gcattggcaaatgctgtaaaagtaactcttggaccaaaaggtcgtaacgtaattatcgga
aaatcatttggcggaccaacggttactaaagatggtgtttcggttgcaaaagaaatcgaa
ttaaaagacccattagaaaatatgggcgcgcaaatggttaaagaagtagcttctaaaact
aatgatttagcgggtgacggaactacaactgctacagttttagctcaggcaatcgtaaaa
gaaggtttgaaaaacgttgctgcaggagcaaatccaatggatttgaaacgcggtatcgac
aaagcggttgaatcaatcgtagctgaccttgcaaaacaagctaaagtagttggaagtgat
tctgataaaatcaaacaaattgcttctatctctgctaacaatgatgaagtgattggagaa
ctaatcgctactgcatttgcaaaagtaggtaaagaaggtgttattactgttgaagaagct
aaaggaactgacacatttgtagacgttgttgaaggtatgcagttcgacagaggatatctt
tctccttacttcgtaacaaatcctgagaaaatggaagttgaattagacgctccatacatt
ttattatacgacaaaaaagtatcttctttaaaagaattactacctgttttagagccggtt
gctcaatccggaaaaccattattgatcatcgctgaagatgttgacggtgaagctttatct
acattggtagtaaacaaactacgtggagctttaaaaatcgctgctgttaaagcacctggt
tttggagacagaagaaaagcaatgttagaagatatcgcaatcttaactggtggaactgta
atctctgaagaaagaggttatactttagaaaacactactattgacatgttaggaaacgca
aaaagagtttctatcgacaaagacaatactacaattgtaagcggtgcaggtgaagcagat
atcatcaaaaacagagtaaaccaaattaaaggtcagatggaaactacaacttctgattat
gataaagaaaaattacaggagcgtttggctaaattagccggtggtgtcgctgttctttat
gttggtgctgcttctgaagtagaaatgaaagagaaaaaagacagagttgacgatgcatta
cacgcaactcgcgctgctgttgaagaaggaatcgttgcaggtggtggtgttgctttatta
agagctaaagctgctttagctgacttaaaagcggacaatgctgacgaagcaaccggaatt
caaattgtatctcgtgctgttgaatctccattaagaactattgttgaaaatgcaggtctt
gaaggctctgtagtagtagcaaaagttggtgaaggttctggtgactttggctacaatgct
aaaactgacgaatatgtagacatgcttaaagccggtattatcgatcctaaaaaagtaact
cgtgtagcgttagaaaatgctgcttcggtttcaggaatgatcttaactactgagtgtgca
ttaatcgatattaaagaagagaatgccggaggcggaatgccaatgggaggcggtatgcca
ggaatgatgtaa
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