Flavobacterium sp. CFS9: CFS9_26020
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Entry
CFS9_26020 CDS
T11517
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
flq Flavobacterium sp. CFS9
Pathway
flq03030
DNA replication
flq03430
Mismatch repair
flq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
flq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CFS9_26020
03430 Mismatch repair
CFS9_26020
03440 Homologous recombination
CFS9_26020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
flq03032
]
CFS9_26020
03400 DNA repair and recombination proteins [BR:
flq03400
]
CFS9_26020
Enzymes [BR:
flq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CFS9_26020
DNA replication proteins [BR:
flq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CFS9_26020
DNA repair and recombination proteins [BR:
flq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CFS9_26020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
RNase_H_2
GIY_YIG_2
Motif
Other DBs
NCBI-ProteinID:
BFM43961
UniProt:
A0AAT9H3C5
LinkDB
All DBs
Position
complement(3112519..3113907)
Genome browser
AA seq
462 aa
AA seq
DB search
MKKQEYTIVDIETTGGNASGSCITEIAIVIHDGKNVMERFETLVNPQKEIPLPIFALTGI
NNEMVANAPIFDDIAEKVMELLNDRIFVAHNVNFDYSFVRHQLEASGFKWTARKLCTVRA
ARKIRPGFPSYSLGKLCNSLDIPLENRHRAGGDAEATAILFTRLLEWDDEGHIEKMIKNT
AQDQRLPPNLPPEDFNNLPEKPGVYYFYNEVKKVIYVGKAVNIKKRVASHFSGHNINPQR
QHFLRDIYSISYEVCGNELMALLLECTEIKHLWPTYNRALKRFEPKFGLYQYEARNGYKY
LAIGKLNKFQSCIEHFSSLHEATNILRGLAERFEIDYRFCKYSKPEEGELFQNNDITDFP
EASFHNEQVDNAIDFLLNNRPTFAIIEKGRTAHERSCIWIENGHFYGMGYIPLDVAITDP
SEVKNYATPYKSNQYIVQLIFAYAEKNPRKVFFNKNLLTSRI
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagcaggaatataccatagtcgatattgaaaccacaggcggtaacgccagtggc
agctgcattacagaaattgccattgtcattcacgacggcaaaaatgtaatggaacgcttt
gaaacactcgtaaatccgcaaaaggaaataccgcttcctatttttgccttaacgggtatc
aacaatgaaatggtagccaatgctcctatttttgatgatattgccgaaaaggtaatggaa
ttgctaaacgaccggatctttgtggctcataatgtcaacttcgattattcgtttgttcgt
caccagcttgaggcctccggattcaaatggacagccagaaagttatgcaccgttcgcgca
gccagaaaaatcagaccgggtttcccctcttatagcttaggaaaactttgcaattcgctc
gacatccctttagagaacaggcatcgtgccggaggcgacgcagaagctactgctatattg
tttacacgattacttgaatgggacgatgaaggtcatattgaaaaaatgatcaaaaacaca
gcacaggatcagcgcttacctcctaaccttcccccggaagattttaataatttacccgaa
aaaccaggtgtatattatttttataatgaggtaaaaaaagtaatctacgtgggaaaagcg
gtcaatatcaaaaaacgtgttgcttctcatttcagcggtcataatatcaatccgcaaaga
cagcatttcttacgcgatatttattccatttcctatgaagtttgtggcaatgagttaatg
gcactcctattagaatgtactgaaatcaaacatctttggccaacttataatagagcttta
aagcgatttgaaccaaaatttggattgtatcaatatgaagcccgtaatggatataagtat
ctggctattggcaaactcaataaatttcagtcgtgtattgagcacttcagcagtttacat
gaagcaaccaatatactgcggggtttagcagaacgatttgaaattgattatagattttgc
aaatattcaaaacctgaagaaggagaactatttcagaataatgatatcacagattttccg
gaagcttcctttcacaatgagcaagtcgacaatgctattgattttttattaaataacaga
cccacttttgccattatagaaaaaggacgaacagcgcacgaacgcagctgtatttggata
gaaaacggtcatttttatggtatgggatatattccgctggatgttgccattacggatcct
tcagaagtaaaaaattatgcaacgccttataaaagcaatcaatacattgtacagttgatt
tttgcttatgcagagaagaacccccgaaaagtttttttcaataaaaatctgctaacctca
agaatataa
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