Flavobacterium sp. CFS9: CFS9_31880
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Entry
CFS9_31880 CDS
T11517
Symbol
rimK
Name
(GenBank) 30S ribosomal protein S6--L-glutamate ligase
KO
K05844
ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
Organism
flq Flavobacterium sp. CFS9
Brite
KEGG Orthology (KO) [BR:
flq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
flq03009
]
CFS9_31880 (rimK)
Ribosome biogenesis [BR:
flq03009
]
Prokaryotic type
ribosomal protein modification factors
CFS9_31880 (rimK)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RimK
Rimk_N
RimB-like
GSH-S_ATP
ATPgrasp_ST
ATP-grasp_3
Dala_Dala_lig_C
R2K_3
GARS_A
ATP-grasp
D123
Motif
Other DBs
NCBI-ProteinID:
BFM44547
UniProt:
A0AAT9H4U8
LinkDB
All DBs
Position
complement(3879016..3880383)
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AA seq
455 aa
AA seq
DB search
MLQNKVILGSEEWCSFPELGIPTIKARVDSGAKTSAMHAINIAPFIKNDTNWVKFDINPI
QNNIKTIIHCEAPLVDKRIVKSSSGFREHRYVIQTHLKIGDIKWPIEMTLTNRDSMGFRM
LLGREAMSGRVLVDPEEKYLLGQPSPEALKELYQNSEKASSGLRIGVLASNPELYSNKRI
MEAGEMRGHEMHFLNIKECYMKLDAKTPEIHYRGGKILNQFDAIIPRIRPSITFYGCALT
RQFEALKVFTLNSATAITQSRDKLYSLQLLLNSGIDIPTTGFANSPLDTDNLIKMVGGSP
LIVKLLEGTQGKGVVLAETKKAAESVINAFKSLNANILVQEFIKEANGKDIRCFVIDGKV
VAAIQREAMPGEFRANIHLGGTASVIKVTAEEKKIAIKAAKAMDLKVAGVDIIRSSKGPL
LLEVNSSPGLEGIEGATNKDVAGEMIKAIEKNFKL
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaaaacaaagtcattttaggtagcgaagaatggtgctcatttccagaactagga
attccgacaatcaaggcccgcgtggattccggtgccaaaacttcggcaatgcacgcaata
aacatagctccttttataaaaaatgataccaattgggtaaaattcgacattaacccaatt
cagaataatattaaaaccatcattcattgtgaagctccgttggttgacaaaagaattgta
aaaagttcaagcggatttagagaacatcgttatgtaattcagacgcatttaaaaattggc
gatatcaaatggccaatcgaaatgacactgacgaacagagattctatgggcttccgaatg
cttttaggccgtgaagccatgagcggacgtgtactcgtggatcctgaagaaaagtatctt
ttaggacagccaagtcctgaagccttaaaagaactttatcaaaattctgaaaaagcaagc
tcaggactaagaatcggagttttagccagtaatcctgaattgtacagcaataaacgaatc
atggaagccggtgaaatgcgcggacatgagatgcattttttgaatatcaaagaatgttac
atgaagctggacgccaaaactcctgaaattcattatcgcggcggaaaaatactaaatcag
tttgatgctattattccaagaatccgaccaagcattactttttatggctgtgccttgacc
cgtcaatttgaagcattgaaggttttcactctaaactcagctactgctatcacacaatca
cgtgataaactttactctttgcagcttcttttaaacagcggaatcgatattccaacgacc
ggatttgcaaattccccactggacaccgacaatttaattaaaatggttggaggatctcct
ttgatcgttaaattattggaaggaactcagggaaaaggggttgttttagctgaaaccaaa
aaagcggcagaaagtgttatcaatgcctttaagagcttaaacgccaacatacttgttcag
gaattcattaaagaagctaacggaaaagacattcgctgttttgttatcgacggtaaagtg
gttgctgcaattcagcgtgaagcaatgccgggtgaattcagagccaatatacatttggga
ggaaccgcatctgtcatcaaagtaactgccgaagagaaaaaaatagccataaaagccgca
aaagctatggacttaaaagtagctggtgttgatataattcgttcttctaaaggaccttta
ttgctcgaagtaaactcttctccgggacttgagggaattgaaggcgccaccaataaagat
gtagcaggtgaaatgattaaagcgattgaaaagaattttaaactataa
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