Flavobacterium sp. CFS9: CFS9_33170
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Entry
CFS9_33170 CDS
T11517
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
flq Flavobacterium sp. CFS9
Pathway
flq03030
DNA replication
flq03430
Mismatch repair
flq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
flq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CFS9_33170
03430 Mismatch repair
CFS9_33170
03440 Homologous recombination
CFS9_33170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
flq03032
]
CFS9_33170
03400 DNA repair and recombination proteins [BR:
flq03400
]
CFS9_33170
Enzymes [BR:
flq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CFS9_33170
DNA replication proteins [BR:
flq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CFS9_33170
DNA repair and recombination proteins [BR:
flq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CFS9_33170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
GIY_YIG_2
RNase_H_2
HK_sensor_dom_bact
DNA_pol_A_exo1
T5orf172
DUF7508
Motif
Other DBs
NCBI-ProteinID:
BFM44676
UniProt:
A0AAT9H5M0
LinkDB
All DBs
Position
complement(4034771..4036132)
Genome browser
AA seq
453 aa
AA seq
DB search
MYAILDIETTGGQFNEEGITEIAIYKFDGHEVIDQFISLVNPEIPIQPFVVKLTGINNAM
LRSAPKFFEVAKRIIEITTDCIIVAHNASFDYRILRTEFRRLGYNFEAKTLCTVELAKKL
IPDQPSYSLGKLVRALGIPMADRHRASGDAMATTKLFKMLLEKDLKKTIVKDFIKLEVEK
GIAPKFLDILAQMPAKTGVYYIYNEDGTLIYIGKSQNIKKRVNQHFTGITTKSKKIQAEV
FTITYDETGSELIALLKESEEIKINRPRYNRSQRKTIFQYALYAEKDTNGYINLKLEKAD
GRKKEITSFATLQEGKNALFRYTSKYQLCQKLTGLYQTKKECFQYKIKECDGACIEEVTP
EVYNARVQQFIAENSFENKSMILLDRGRNVNERSAILIENGLYKGYAFYDLNYQITNIEI
LKNILIPMQHNRDVKNIIQSYLRKSKSIKVLHF
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
ttgtacgcaatactagacatagaaaccactggaggccagtttaatgaagaaggaattacc
gaaattgccatttacaaatttgatggccacgaggtaattgaccagttcatcagccttgtc
aatcctgaaattccgattcagcccttcgtggtgaaattaactggaatcaataatgctatg
ttgcggtctgctcctaaattttttgaagttgctaaacgaattatagaaatcactacagat
tgtataattgtagcacacaatgcttcttttgattaccgaattttacgcacagaattcaga
cgtttgggttacaattttgaagccaaaaccctttgtacagtcgaacttgccaaaaaatta
attccggatcaaccttcctatagtttaggaaaactggtacgagcccttggaattccaatg
gcagacagacatcgtgccagcggagatgcaatggcaacaaccaagctgtttaaaatgctt
ctggaaaaagacttgaaaaaaactattgtaaaagattttatcaaactggaagtagaaaaa
ggaattgctccgaaatttctggacattctggcacaaatgcctgctaaaactggtgtgtat
tacatttacaatgaagacggaactctaatctacattggaaaaagtcaaaacattaaaaag
agagtcaatcagcattttacaggaattaccaccaaaagcaaaaaaattcaggccgaagtt
tttaccatcacctatgatgaaaccggaagcgaattaattgcactcttaaaagaaagcgaa
gaaataaaaataaatcgtcccagatataatcgttcacaacgaaaaacgatctttcagtat
gctttatatgcagagaaagacactaatggttatatcaatttaaaacttgaaaaagcggac
ggccgtaaaaaagagattacctcatttgcaactttgcaggaaggtaaaaatgcgctgttc
agatatacgtcaaaataccagttatgccaaaagctaacaggactttatcaaaccaaaaaa
gagtgtttccagtataaaatcaaagaatgtgatggcgcctgtattgaagaagtaacacct
gaagtttacaatgcccgtgtacaacaatttatcgcggaaaacagtttcgaaaataaaagc
atgattctactggacagaggccgaaatgtcaacgaaagaagcgctattttaatcgaaaat
ggtctttataaaggatatgccttttacgatctaaattatcagattacgaacatcgagatt
ctaaaaaacattttaattccgatgcagcacaatcgtgacgtgaaaaacattattcaaagc
tacctccgaaagagtaaatctataaaggttcttcatttttaa
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