Flavobacterium sp. CFS9: CFS9_36430
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Entry
CFS9_36430 CDS
T11517
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
flq Flavobacterium sp. CFS9
Pathway
flq03030
DNA replication
flq03430
Mismatch repair
flq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
flq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CFS9_36430 (holA)
03430 Mismatch repair
CFS9_36430 (holA)
03440 Homologous recombination
CFS9_36430 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
flq03032
]
CFS9_36430 (holA)
03400 DNA repair and recombination proteins [BR:
flq03400
]
CFS9_36430 (holA)
Enzymes [BR:
flq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CFS9_36430 (holA)
DNA replication proteins [BR:
flq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CFS9_36430 (holA)
DNA repair and recombination proteins [BR:
flq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CFS9_36430 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
HP_1247_M
UPF0113
UDI
Motif
Other DBs
NCBI-ProteinID:
BFM45002
UniProt:
A0AAT9H690
LinkDB
All DBs
Position
complement(4412333..4413337)
Genome browser
AA seq
334 aa
AA seq
DB search
MDEVVKIVNDIKAGNIKPIYFLMGEEPYYIDKLSEYIEQNVLAEEEKGFNQTVLYGRDVT
VEDIVATAKRYPMMADRQVVIVKEAQDLSRTIDKIESYVGNPMETTVLVFCYKYKTLDKR
KKVTKLLAQKGIVYESKKLYENQVGDWIKRVLAGKKYTIDPKANAMLVEFLGTDLSKINN
ELEKLQIILPQGTVITPQHIEENIGFSKDYNVFELRKAIGERNQLKAYKIAENFAHNPKE
YPLVMTTGLVFGFFVQLLKYHGLKDKNPKNVATAIGVNPYFLKEYDLAIKNYPMRKVSQI
VGALRDVDVKSKGVGANALPQSDLLKEMLYKIFN
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagtagtaaaaattgttaatgatataaaagccggaaatataaaaccgatctat
tttttaatgggtgaagagccatattatattgataaattatcggagtatattgaacaaaat
gtgcttgctgaagaagaaaagggattcaatcagactgttttgtacggaagagatgtaacg
gttgaagatatcgtggcaacggccaagcgctatcctatgatggctgatcgtcaggttgtt
attgtgaaagaagcacaggatttatcacgaacaattgataaaatagagtcttatgtaggc
aatccgatggaaacaacggtactggttttttgttataaatacaaaacactggacaagcgt
aaaaaagtaaccaaattactggctcagaaaggaattgtttatgaaagtaaaaaattatac
gaaaatcaggttggtgactggataaaacgcgtgcttgccggaaagaaatatacaattgat
ccaaaagccaatgccatgttggttgaatttttgggtaccgatttgagtaagattaataat
gagttagaaaaattacaaatcattctgccgcaaggaacggttattacaccccaacatatc
gaggaaaatattggttttagtaaagattataatgtttttgaattgcgaaaagccataggg
gaacgtaatcagttgaaggcctataagattgcggagaattttgcccataatcctaaagaa
tatccactggtaatgacaacgggattggtattcggtttctttgtacaacttttaaaatac
cacggacttaaagataaaaaccctaaaaatgtagcaacagccattggagtcaatccttat
tttttaaaagagtatgatttagcgataaaaaactatccaatgcgaaaagtgagccagatt
gtaggcgcactacgtgatgttgatgttaaaagcaaaggagtaggagcaaatgcattacca
caatccgatttgttaaaagaaatgctctataaaatattcaattaa
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