Flavobacterium sp. CFS9: CFS9_39080
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Entry
CFS9_39080 CDS
T11517
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
flq Flavobacterium sp. CFS9
Pathway
flq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
flq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CFS9_39080 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
flq03400
]
CFS9_39080 (xseA)
Enzymes [BR:
flq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
CFS9_39080 (xseA)
DNA repair and recombination proteins [BR:
flq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
CFS9_39080 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
HATPase_c_4
Motif
Other DBs
NCBI-ProteinID:
BFM45267
UniProt:
A0AAT9H711
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All DBs
Position
complement(4751351..4752787)
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AA seq
478 aa
AA seq
DB search
MGSDQYIRLSQLSDQIQDTINSRFKGQTYWVVADITNHSFKADKKIHYFELVEKSETSSV
ITAKILGKSWGAGALRILDFEITTGQRFTNNLHVLVQLSVDYHPLYGLSVNLLDIDSNFM
LGILEQQRNATLARLVRENDFIHKEGEGYSTLNSRLKLPVVIQRVAVISSSSSAGNEDFR
HTMQHNDFGYVFQIDDYHTVVQGDNNAKLFLSKLIEVYNTGIPYDAIVITRGGGSQSDFL
IFDNYNIGRAVAKFPIPVITGIGHQKNVSITDLMVHTHTKTPTKAAEFIIAHNRSFEQHI
LDLQRRIAIKSQQLFLRHYKELSELKSLVTHNARELISMQKEELILKKQHISQESRNLLA
KEKQILLLTAQKTFQRPQSIIQQKNNDLQHLKANLKIFTNQYLRSRKLELEDYQKTIKLL
SPQHVLSRGYAVIRKNNQIVNGAENIQEGEEIEILLKDAVLKSTVNEKIDYDGKDTHL
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgggatcagaccagtatatcagactctcacagctgagcgaccagatccaggacacgatc
aattcccgctttaagggacagacgtactgggtagtggctgatatcactaatcattccttc
aaggcagacaaaaagatccattactttgaactggtggaaaaatcagagacaagcagtgtg
atcacagccaagatactgggtaagagttggggagcaggtgcgctgagaattcttgatttt
gaaatcacaaccgggcaacgcttcactaacaacctgcatgtgctggtgcagttgagtgtg
gactaccatccgctctacggactttcggtaaaccttctggatatcgacagcaattttatg
ctcggtatcctggaacaacagcgcaatgccacgcttgccagactagtaagggagaatgat
ttcatacataaagagggtgaggggtactccacgctaaacagccgtcttaaacttcctgtg
gtaatccaaagggttgcagttatctcttcgagcagttctgccggaaatgaggatttccgt
catactatgcaacacaatgattttggatatgttttccagatcgatgactaccatactgtt
gtccagggcgacaataatgccaaactgttcctcagcaagctcattgaggtctacaatacg
ggtattccttatgatgctattgtcattacaaggggaggcgggtcgcagtctgacttcctg
atttttgacaattacaatatcggtagggctgtcgccaaattccccatcccagtaataacg
ggaatcggccaccagaaaaacgtgagcattaccgacctaatggttcatacccacaccaaa
accccgaccaaggcggcggagttcatcatagcgcacaaccgcagttttgagcagcatata
cttgatctgcaaaggagaatagccatcaaatcgcagcagctttttctgaggcattacaaa
gaactcagtgagcttaaaagtctggtcacccataatgcaagggaattgatttccatgcag
aaggaagaactgatactgaagaagcagcatatttcccaggaaagccgaaacctgctagca
aaagaaaagcagattcttctgctgactgcccaaaaaacgtttcagcggccgcagagcatc
atccaacaaaaaaacaacgatctgcagcatttaaaagcaaacctgaaaatcttcaccaat
caatatctgcgcagccgcaaacttgaattggaggactaccagaaaacgataaaactactg
tccccacagcatgtgctgagcagaggatatgccgtgatacggaaaaacaaccaaattgta
aacggagctgagaacatacaagaaggagaggaaatagaaatactattaaaagatgccgta
ctgaaaagtacggtcaatgaaaaaatagattatgatggaaaggacactcacttatga
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