Flavobacterium sp. WV_118_3: ABFU83_07390
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Entry
ABFU83_07390 CDS
T10639
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
flr Flavobacterium sp. WV_118_3
Pathway
flr03030
DNA replication
flr03430
Mismatch repair
flr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
flr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABFU83_07390 (holA)
03430 Mismatch repair
ABFU83_07390 (holA)
03440 Homologous recombination
ABFU83_07390 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
flr03032
]
ABFU83_07390 (holA)
03400 DNA repair and recombination proteins [BR:
flr03400
]
ABFU83_07390 (holA)
Enzymes [BR:
flr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABFU83_07390 (holA)
DNA replication proteins [BR:
flr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABFU83_07390 (holA)
DNA repair and recombination proteins [BR:
flr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABFU83_07390 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
HP_1247_M
UPF0113
Motif
Other DBs
NCBI-ProteinID:
XBB77254
LinkDB
All DBs
Position
complement(1583986..1584990)
Genome browser
AA seq
334 aa
AA seq
DB search
MEEVLKIIKDIKAGDIKPIYFLMGEEPYYIDKLTDYIEDTILSEEEKGFNQMVLYGRDVT
IDDIVSNAKRYPMMADRQVVIVKEAQELSRTIDKLESYAENPQPTTVLVVCYKYKTLDKR
KKVTKVLEKAGVVFESKKLYENQVGDWLKRVLSGKGYQIEPKAAAMLVEFLGTDLSKIAN
ELDKLAIILPKGSTISPKIIEDNIGFSKDYNNFELRKAIGEKNQLKAYQIADYFAQNPKD
NPLVVTTGLIFGFFSQLLQYHGLKDKSPANAAKVLKVNPYFLKDYDVALRNYPMKKVSQI
VAVLRDIDVKSKGVGANALPQQDLLKEMLVKIFN
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
ttggaggaagtactaaagattataaaagatattaaagccggcgacattaaaccgatttat
tttttaatgggagaagaaccttattatattgataaactaacggattatatcgaggatact
attttatcggaagaggaaaaaggctttaaccagatggttttatacggtcgtgatgttacg
atagacgatattgtatcgaatgcaaaacgctatccgatgatggccgacagacaagtcgtg
attgttaaagaagcgcaggaattgtcgcgaacgattgacaaactggaaagttatgccgaa
aatccacagccaacgacggttttggtggtatgttataaatacaaaacgttggacaaacgt
aaaaaagtgaccaaagtactggaaaaagccggcgtagttttcgagagtaaaaagctgtat
gaaaaccaggtcggtgactggcttaaacgggtgttatccggtaaaggatatcagattgag
ccgaaagccgctgcgatgttggtggaatttttgggaaccgatttaagcaagattgccaac
gaactcgataaactcgcgattattttaccaaaaggaagtacgattagtccaaaaataatt
gaagataacatcggatttagcaaagattataacaactttgagttacgcaaggcgataggt
gagaagaaccagttaaaagcctatcagatcgcggattattttgctcaaaatccaaaagac
aacccattggtcgtgacaaccggacttattttcggattcttttcccaattgttgcaatac
cacggattaaaagacaaaagtccggctaatgctgcgaaggtgctaaaagtgaatccgtat
tttctaaaagattacgatgtcgccttgcgaaactatccgatgaaaaaggtaagccagatt
gtcgccgttttacgcgatatagacgtaaaaagcaaaggagtaggcgccaatgctttaccg
caacaggatttgctaaaagaaatgctggttaagatattcaattag
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