Flavobacterium sp. WV_118_3: ABFU83_08405
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Entry
ABFU83_08405 CDS
T10639
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
flr Flavobacterium sp. WV_118_3
Pathway
flr00260
Glycine, serine and threonine metabolism
flr00460
Cyanoamino acid metabolism
flr00630
Glyoxylate and dicarboxylate metabolism
flr00670
One carbon pool by folate
flr00680
Methane metabolism
flr01100
Metabolic pathways
flr01110
Biosynthesis of secondary metabolites
flr01120
Microbial metabolism in diverse environments
flr01200
Carbon metabolism
flr01230
Biosynthesis of amino acids
flr01240
Biosynthesis of cofactors
flr04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
flr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
ABFU83_08405 (glyA)
09102 Energy metabolism
00680 Methane metabolism
ABFU83_08405 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
ABFU83_08405 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
ABFU83_08405 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
ABFU83_08405 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
ABFU83_08405 (glyA)
Enzymes [BR:
flr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
ABFU83_08405 (glyA)
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Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
XBB77450
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Position
complement(1807406..1808680)
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AA seq
424 aa
AA seq
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MQRDEQIFDLILEEQDRQIHGLELIASENFVSDQVMEAAGSVLTNKYAEGYPGKRYYGGC
EVVDVIEQIAIDRAKALFGADYVNVQPHSGSQANTAVFAACLKPGDKILGFDLSHGGHLT
HGSPVNFSGKLYNPVFYGVEKETGMLNYDKIQEVATQEQPKLIIAGASAYSRDMDFKRFR
EIADSVGAILMADISHPAGLIAKGLMNDPVPHCHIITTTTHKTLRGPRGGMIMMGKDFEN
PFGVKTPKGEIRMMSSLLDGSVFPGNQGGPLEHIIAAKAVAFGEALSDEFFTYAMQVQKN
AKAMAEAFVKRGYNIISGGTDNHMMLIDLRNKNISGKEAENALVKAEITVNKNMVPFDDK
SPFVTSGIRVGTPAVTTRGLVESDMETIVALIDKVILNHTDEAVLEEVADAVNDMMGERA
MFVF
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgcgacgaacaaattttcgacttaattcttgaagaacaagacagacaaattcac
ggcttggaacttattgcatctgagaatttcgtgagcgatcaggtaatggaagctgcgggt
tcagttttaacgaataaatatgcggaagggtacccgggtaaacggtattacggtggatgt
gaagtagtagacgtaatcgaacaaattgcaattgacagagctaaagctttgtttggagct
gactatgtaaacgtacagccacactccggatcgcaagccaacacagccgtttttgcagcc
tgtttaaaaccgggcgataaaatattaggtttcgatctttcacacggaggacatttaaca
cacggttcgccggtgaacttttccggaaaattatacaatccggtattctacggagtggaa
aaagaaaccggaatgctgaactacgataagattcaggaagtagcaacccaggaacagcca
aaattgattattgcaggagcttcggcttattcccgcgatatggattttaaacgtttccgc
gagattgccgacagtgtaggggctattttaatggcagatatttcacatccggccggtttg
attgctaaaggattgatgaacgatccggttccgcattgtcatatcatcacgacaacaaca
cacaaaaccctacgtgggccaagaggtggaatgatcatgatggggaaagattttgaaaat
ccgtttggagtcaaaacaccaaaaggagaaatccgtatgatgtcgtctttattggacgga
tcggtattcccgggtaaccagggaggaccgttggagcatatcattgcggcaaaagcagta
gcctttggcgaagcgttaagcgatgagttctttacctatgcaatgcaggttcagaaaaat
gcaaaagctatggcagaagcctttgtaaagagaggatacaacattatttcgggcggtacc
gataatcatatgatgctgatcgatcttagaaataaaaatatttccgggaaagaagctgaa
aatgctttggtaaaagctgaaatcaccgtaaataaaaatatggttcctttcgatgataaa
tcaccatttgtaacctctggtatccgagtgggaactcctgcggtaacgacgcgtggtttg
gtagaatccgatatggaaaccatcgtagctttgatcgataaagtgattttaaatcataca
gacgaagcagtattggaagaagtagccgatgcagtaaacgacatgatgggcgaacgcgcc
atgtttgttttctaa
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