Flavobacterium sp. WV_118_3: ABFU83_09725
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Entry
ABFU83_09725 CDS
T10639
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
flr Flavobacterium sp. WV_118_3
Pathway
flr00300
Lysine biosynthesis
flr00470
D-Amino acid metabolism
flr01100
Metabolic pathways
flr01110
Biosynthesis of secondary metabolites
flr01120
Microbial metabolism in diverse environments
flr01230
Biosynthesis of amino acids
Module
flr_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
flr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ABFU83_09725 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ABFU83_09725 (lysA)
Enzymes [BR:
flr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
ABFU83_09725 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
MC7
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
XBB74311
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Position
2080059..2081267
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AA seq
402 aa
AA seq
DB search
MQNNHLLSVAEAFGSPVYVYDAEKMQSQYQRLTNAFSKVEKLRINYAVKALSNLSVLKLL
KKMGSGLDTVSIQEVQLGLLAGFTPERIIYTPNGVSMEEIEEVAQLGVQINIDNLSILEQ
FGAKHPTTPVCIRINPHVMAGGNSNISVGHIDSKFGISIHQVPHLLRIIENTQMHINGIH
MHTGSDILDIEVFLYAAEILFETASHFKELEFIDFGSGFKVPYKKDDIETNVEELGKKLS
RRFNAFCKEYGRELTLAFEPGKFLVSEAGYFLAKVNVVKQTTSTVFAGIDSGFNHLIRPM
FYGSQHHIENISNPKGKERFYTVVGYICETDTFGSNRRISEIKEGDILCFRNAGAYCFSM
SSNYNSRVRPAEVLWYNGKTHLIRERETFEDIIRNQVIVDFE
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacaatcatttactttcagtagcggaagcatttggcagtcctgtttatgtatac
gacgccgaaaaaatgcaatcacagtaccaacgtttaaccaatgctttttccaaggtggaa
aagttgcgcatcaattatgcagtcaaggcattgtcgaacctatctgttcttaagctactg
aagaagatgggatcggggcttgacacggtatctattcaagaggtacagttaggcttactt
gcaggctttacgcccgagcgaatcatctatacgcctaacggggtttcgatggaagaaatc
gaggaagtagcacaactgggcgttcagatcaatatcgataatttatccattttggagcaa
ttcggagccaaacatccaaccacacccgtttgtatccgaatcaatccacatgtcatggcg
ggcggtaactcgaatatttccgtaggccatatcgatagcaaattcggaatttcgattcat
caggtaccccatttgctgcggattatcgaaaatacacaaatgcacatcaacgggattcat
atgcacaccggttcggatattctggacattgaggtgtttttatatgcggccgaaatatta
tttgaaacggccagtcattttaaagaactggaatttatcgacttcggaagcggttttaaa
gtaccctataaaaaagacgatatcgaaaccaatgtcgaagaactgggaaaaaaattatcc
cgtcgttttaatgccttttgcaaagaatacggtcgcgaacttacattggctttcgagccg
ggtaaattcctggtgagcgaagccggttattttctggctaaagtaaatgtggtcaaacaa
accacctcaaccgttttcgcgggtatcgacagcggttttaatcatctcattcgcccgatg
ttttacggatcgcaacatcatatcgaaaacatttccaatccaaaagggaaagagcgtttt
tataccgttgtgggttatatttgtgaaaccgatacctttggcagtaaccgtcggatttcc
gaaatcaaagagggcgatatactgtgtttccgcaatgccggagcctattgtttttcgatg
tcgtccaattacaattcgagagtacgcccggccgaagtgctttggtataacggaaaaaca
cacctgattcgcgagcgggaaaccttcgaagacatcatccgtaatcaggttattgtagat
tttgaataa
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