Flavobacterium sp. WV_118_3: ABFU83_10160
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Entry
ABFU83_10160 CDS
T10639
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
flr Flavobacterium sp. WV_118_3
Pathway
flr03030
DNA replication
flr03430
Mismatch repair
flr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
flr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABFU83_10160
03430 Mismatch repair
ABFU83_10160
03440 Homologous recombination
ABFU83_10160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
flr03032
]
ABFU83_10160
03400 DNA repair and recombination proteins [BR:
flr03400
]
ABFU83_10160
Enzymes [BR:
flr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABFU83_10160
DNA replication proteins [BR:
flr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABFU83_10160
DNA repair and recombination proteins [BR:
flr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABFU83_10160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
GIY_YIG_2
RNase_H_2
DEDDh_C
DNA_pol_A_exo1
DUF7508
Motif
Other DBs
NCBI-ProteinID:
XBB74396
LinkDB
All DBs
Position
2171696..2173057
Genome browser
AA seq
453 aa
AA seq
DB search
MYAILDIETTGGQYNEEGITEIAIYRFDGHEVVDQFISLVNPEIPIQPFVVKLTGINNAM
LRSAPKFYEVAKRIIEITQDCIIVAHNAAFDYRVLRMEFRRLGYEFNRNTLCTVELSKKL
IPDQPSYSLGKLVRSLGIPIADRHRATGDAMATVKLFKMLLSKDLKKEIVTTFIKKEIKS
GMSPKLLDIVEGIPSKTGIYYIHREDGTIIYIGKSKNIKKRVNQHFTGTSRKAKKIQNEV
YAVTFEETGSELIALLKESEEIKINKPIYNRAQRKTIFPWALYVEKDSEGYLSLRLAKAD
GRKKEITSFVTVVEGKNFLHKITAEYQLCQKINGLYDTKKGCFQYDIKQCNGACIGKERA
AEYNVRVQDFIDNYQFQNQNMVIVDRGRSIDERTAILVENGIYKGYCFYDLNYQINNIDI
LKKIIIPMENNRDTRNIIQNYLRKKKVNKVVTF
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
ttgtacgctatacttgacatagaaacaacaggaggacaatataacgaagaaggcattacc
gaaattgccatctatcgtttcgacggccatgaagtggtcgatcagtttattagtctggtt
aaccctgaaattcccatacaaccgtttgtagttaaactgaccggtattaataatgccatg
ctacgttcggctcctaaattttatgaagtcgccaaacgtatcatcgaaattacacaggat
tgtattatcgtggcgcacaatgcggctttcgattatcgcgtactccgtatggaattccga
cgattgggttatgaattcaaccgtaatacgctgtgtacggtagagttatctaaaaaacta
attcccgatcagccttcctatagccttggaaaactcgttcgtagtcttggcattccaatc
gccgaccgtcatcgtgcgaccggcgatgcgatggccaccgtaaagctgtttaaaatgctt
ttgtccaaggatcttaaaaaggaaatcgtcacgacttttatcaaaaaggaaatcaaatcc
gggatgtcgccaaaattgctggacattgtggaaggtattccatccaaaaccggcatttac
tacatccatcgtgaagacggaaccattatttatatcggcaaaagcaaaaacattaaaaaa
cgcgttaaccagcattttacaggaacttcccgtaaggctaaaaaaatacaaaacgaggtt
tacgccgtcacttttgaagaaaccggtagcgaattgattgcgcttttaaaagaaagcgaa
gaaatcaagatcaacaaaccgatttataaccgtgcacaacgcaaaaccatctttccgtgg
gctttatatgttgaaaaagacagcgaaggttatttgagtcttcgtctggcaaaagccgat
ggtcgcaaaaaagaaattacctcttttgtaaccgttgtggaaggtaaaaacttcctgcat
aagattaccgccgaataccaattgtgtcagaagatcaacggtttgtacgataccaaaaaa
ggttgttttcaatacgatatcaaacaatgtaacggtgcctgcatcggtaaagaaagggct
gcagagtacaatgtacgcgtacaggattttatcgacaactatcagtttcagaaccagaat
atggttattgtggatcgcggtcgcagtatcgacgaacgaacggccatattggtggaaaat
ggcatctataaaggctattgtttttacgatctgaattaccagatcaacaacatcgatatt
ctaaaaaagatcattatcccgatggaaaacaaccgggatacccgcaatattattcagaat
tacctgcggaagaaaaaagtcaacaaagtagtaacgttttaa
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