Flavobacterium sp. WV_118_3: ABFU83_12195
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Entry
ABFU83_12195 CDS
T10639
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
flr Flavobacterium sp. WV_118_3
Pathway
flr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
flr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABFU83_12195 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
flr03019
]
ABFU83_12195 (groL)
03110 Chaperones and folding catalysts [BR:
flr03110
]
ABFU83_12195 (groL)
03029 Mitochondrial biogenesis [BR:
flr03029
]
ABFU83_12195 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
flr04147
]
ABFU83_12195 (groL)
Enzymes [BR:
flr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
ABFU83_12195 (groL)
Messenger RNA biogenesis [BR:
flr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ABFU83_12195 (groL)
Chaperones and folding catalysts [BR:
flr03110
]
Heat shock proteins
HSP60 / Chaperonin
ABFU83_12195 (groL)
Mitochondrial biogenesis [BR:
flr03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
ABFU83_12195 (groL)
Exosome [BR:
flr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ABFU83_12195 (groL)
Exosomal proteins of other body fluids (saliva and urine)
ABFU83_12195 (groL)
Exosomal proteins of breast cancer cells
ABFU83_12195 (groL)
Exosomal proteins of colorectal cancer cells
ABFU83_12195 (groL)
Exosomal proteins of bladder cancer cells
ABFU83_12195 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Pho88
Motif
Other DBs
NCBI-ProteinID:
XBB74783
LinkDB
All DBs
Position
2607177..2608808
Genome browser
AA seq
543 aa
AA seq
DB search
MAKDIKFDIEARDGLKRGVDALANAVKVTLGPKGRNVIISKSFGGPTVTKDGVSVAKEVE
LKDTLENMGAQMVKEVASKTNDLAGDGTTTATVLAQAIVKEGLKNVAAGANPMDLKRGID
KAVEAIVADLQKQAQEVGSSTDKIKQVASISANNDDVIGDLIATAFGKVGKEGVITVEEA
KGTDTYVDVVEGMQFDRGYLSPYFVTNPEKMEVELERPYILLYDKKVSSLKELLPILEPV
AQSGKPLLIIAEDVDGEALSTLVVNKLRGALKIAAVKAPGFGDRRKAMLEDIAILTGGTV
IAEESGYNLENATLDMLGTCEKVTIDKDNTTIVNGAGEADMIKNRVNQIKAQMETTTSDY
DKEKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALL
RAKTVLANIKADNADEATGVQIVSRAVEAPLRTIVENAGLEGSVVVAKVAEGKDSFGYNA
KTDEYVDMLKAGIIDPKKVTRVALENAASVSGMILTTECALIEIKEENAAGAMPMGGGMP
GMM
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatataaaatttgatattgaagcacgcgatggtttaaaacgcggtgtagac
gcattggcaaacgcagtaaaagtaactttaggtcctaaaggacgtaatgtaatcatcagt
aaatcgtttggcggaccaaccgtaacaaaagatggagtttctgtagcaaaagaagtggaa
ttaaaagacactttggaaaacatgggagcacaaatggtaaaagaagtagcttccaaaaca
aatgatctagccggtgacggtactaccactgcaacggttttggcacaggctatcgtaaaa
gaaggtcttaaaaacgtagcagctggtgccaatccaatggatttaaaaagaggtatcgac
aaagcggtagaagctattgtagccgatcttcagaaacaggcacaggaagtaggcagctca
accgacaaaatcaaacaggttgcctcaatttctgccaacaacgatgatgtaattggtgat
ttgatcgctactgctttcggaaaagttggaaaagaaggtgttattaccgttgaagaagca
aaaggtaccgacacttacgtggatgtggtagaaggaatgcagttcgacagagggtattta
tcaccttacttcgtgaccaatccggaaaaaatggaagtggaattagaaagaccgtatatt
cttttatacgacaaaaaagtatcgtctttaaaagagttattaccgatcctggaaccagtg
gcacaatcgggtaaaccactattgatcattgctgaagatgtagatggtgaagcgctttct
actttggtggtaaacaaactaagaggtgcattaaaaatcgctgccgttaaagcaccaggc
tttggcgacagaagaaaagcgatgttggaagatattgccatcctgacaggtggaactgtt
atcgcggaagaaagcggatacaacctggaaaacgcaacgttggatatgttgggaacctgt
gaaaaagtaaccatcgacaaagacaatacgactatcgtaaacggtgccggtgaagcggat
atgattaaaaaccgtgtgaaccagattaaggctcaaatggaaacaactacatccgattac
gacaaagaaaaattacaggaacgtcttgctaaattggctggtggtgtagcggtattatat
gttggtgcggcttctgaagtggaaatgaaagagaaaaaagaccgtgtggatgatgcctta
catgcaactcgtgcagcagtagaagaaggaattgttgccggtggtggtgttgctttacta
cgtgctaaaacggttttagcaaatattaaagccgacaatgctgacgaagcaaccggagtt
cagattgtttcccgtgctgttgaagcgccgttacgtactattgttgaaaatgctggattg
gaaggttcggttgttgtagcaaaagtagccgaaggtaaagacagtttcggatacaacgct
aaaacagacgaatacgtagacatgctaaaagccggaattatcgatccgaaaaaagtaacc
cgtgtggcacttgaaaatgctgcttcggtatcgggtatgatcctgaccacggagtgtgcc
ttaattgaaatcaaagaggaaaacgctgctggtgccatgccaatgggtggcggaatgcca
ggaatgatgtaa
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