Flavobacterium sp. WV_118_3: ABFU83_12615
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Entry
ABFU83_12615 CDS
T10639
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
flr Flavobacterium sp. WV_118_3
Brite
KEGG Orthology (KO) [BR:
flr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
flr01002
]
ABFU83_12615
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
flr01011
]
ABFU83_12615
Peptidases and inhibitors [BR:
flr01002
]
Cysteine peptidases
Family C82
ABFU83_12615
Peptidoglycan biosynthesis and degradation proteins [BR:
flr01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
ABFU83_12615
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
XBB74859
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Position
2694520..2696115
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AA seq
531 aa
AA seq
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MLQRYCLLLVPMFLFGCKKEPAAIADKQIVHKDTVKVAPLAFPEAIAIDSTYFANSSDVV
KQFYKNNLYKTVWTLEKDRSALTESIKNIELDGLNPDDYNFSTITEQDNNHKNLAEKDRI
TNDILHTEIFYKLASHLYNGKLEPTKLYSDWDMYPKEIDLSHKLQYALKNHTILQSLDSL
KPQHIVYLRLKDALRKIESMPNDNLKHIAVKDKLIPNDTNAAIIDVKKRLAYWGDYKKPD
SLTKIYDDKTQSAVKKFQKRHGLTPDGVIGKGTVAAMNLSKAQRKKQIIANLERWRWFPR
DLGESYVIINIPDFNLYLVNNNDTIQNHRVVVGRAKRRTPVLSSKFSNLVINPTWTVPPT
ILKEDLTPSASRNLNYFASTGITIYDMKGNVVSPENWNAGKSNNYRYVQKPGSNNSLGLI
KFNFSNKHLVYLHDTNHRDFFKLNNRALSSGCIRVEDPFKLSGFILEKEENNWSKERVDK
MIASNKTQSIVLKKPTFVHQLYWTAWMDKDGLQFRNDIYDLDFELYAKLRD
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaacgctactgtctattattggttcccatgtttctttttggctgcaaaaaggaa
ccggctgctattgcagacaaacaaattgtacacaaagacacggtaaaagtggcgccgctt
gcttttcccgaagctattgcaattgattctacttattttgccaatagttccgatgttgta
aaacaattctataaaaacaacctgtataaaaccgtatggacgctggaaaaggatcgttct
gcactaaccgaatccattaaaaacattgagttagatggccttaacccggacgattataac
tttagtacgattacagaacaagacaacaatcataaaaatctggccgaaaaagaccggatc
acaaatgatatccttcatacggaaatcttctataaactggccagccatttgtataatggt
aaactggaaccgaccaaattatattccgattgggatatgtatccgaaagagattgacctt
agtcataaattacagtatgcgctaaaaaaccataccattctgcaaagtctggactcttta
aaaccacaacacattgtctatttaaggttaaaagatgcgcttcgcaaaatcgaaagtatg
cccaatgacaatcttaaacatattgctgttaaggacaaattgattcctaacgataccaat
gcagctataatcgacgtcaaaaagcgactggcctattggggtgattataaaaaaccggac
tccctgacaaaaatatacgacgataaaacacagtcggctgtaaaaaaattccagaaacga
cacggcttaacacccgatggcgtaatcggaaaaggaaccgtagccgcgatgaatctctcg
aaagcacaacgaaaaaaacaaatcatagccaatttggaacgttggcgttggttcccaaga
gatttaggcgaaagctatgtaattattaatattcctgattttaatttatacctggtcaac
aacaacgatacgatccagaatcaccgggtggttgtgggacgcgccaaaagacgtacgccg
gtattatcgtcaaagttcagtaatttggtgatcaatcctacatggacggttccaccaacg
attttaaaagaagacctgacgccgtcggccagtagaaacctgaattattttgcctcaacc
ggaatcaccatttacgatatgaaaggaaatgtggttagtccggaaaattggaatgccgga
aaatccaacaattatcgctatgtacaaaaaccgggatccaataattctttaggattaatc
aaatttaattttagcaataaacatctggtatatctgcatgacaccaatcaccgggatttc
tttaaactcaataacagagcgttaagttcgggctgtatccgtgtcgaagatccatttaag
ttgtccggatttattctggaaaaagaagaaaacaactggagtaaggaacgtgtggataaa
atgattgcatccaataaaacgcaaagtattgtattgaaaaaacccacctttgtgcatcag
ctgtactggacagcatggatggacaaagacgggcttcaattcagaaacgatatttatgat
cttgatttcgaactctacgccaaattacgagattag
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