Flavobacterium sp. WV_118_3: ABFU83_13905
Help
Entry
ABFU83_13905 CDS
T10639
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
flr Flavobacterium sp. WV_118_3
Pathway
flr03410
Base excision repair
flr03430
Mismatch repair
flr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
flr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABFU83_13905 (recJ)
03430 Mismatch repair
ABFU83_13905 (recJ)
03440 Homologous recombination
ABFU83_13905 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
flr03400
]
ABFU83_13905 (recJ)
DNA repair and recombination proteins [BR:
flr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ABFU83_13905 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ABFU83_13905 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ABFU83_13905 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
ddrB-ParB
Motif
Other DBs
NCBI-ProteinID:
XBB75104
LinkDB
All DBs
Position
complement(2979087..2980784)
Genome browser
AA seq
565 aa
AA seq
DB search
MRWTLKPNPNPHKTRELAAELGVTPLIAALLVQRGVETFEEARAFFRPAFEHLHDPYLMQ
DMDKAVARIETAITAGENILVFGDYDVDGTTAVALMSSYLRSYYPNVATYIPDRYAEGYG
VSFQGIDFAEDNGFTLIIALDCGIKSVDKVEYAKQKGIDFIICDHHRPGDELPEAIAVLD
PKRQDCAYPYKELCGCGVGFKLIQALSAKRGQSLRDLIPYLDLVATAIAADIVPITGENR
VLAKFGLEVINKNPRPGIKALIKNVKKQELTITDVVFIIAPRINAAGRIKHGNHAVALLT
EFNQKQAEEFASQIETFNADRKDLDRQITKEALKQIETNGEQERYTTVVYQEDWHKGVIG
IVASRLTEVYYRPTLVFTKSGDKLAASARSVKDFDVYNALEACSDYLEQFGGHMYAAGLT
LKESDFESFKNQFERVVSETITPDLLVPEISIDAEIDFSDIDDKLIRILKQFEPFGPENM
TPVFIARHLTDSGYGKAIGQDEEHLRLFVKQQPEGKGYAAIGFGLAKKIGLTQNQKHFDA
VFSIDENEWNGTVSVQLRLRDIKVS
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgcgctggacactcaaacctaacccgaatccccataaaaccagggaactggctgccgaa
ctgggcgtgacgccattaattgctgctttattggtgcaacgcggtgtggaaacctttgag
gaagcgcgcgcttttttccgaccggcgttcgaacatttacacgatccgtacctgatgcag
gatatggataaagccgtggcgcgtatcgaaaccgccataacagccggagaaaatattttg
gtgtttggcgattatgatgtcgacggaactacggctgtggccttaatgagttcgtacctt
agaagctattatccgaatgtagccacctatattcccgaccggtatgcggaagggtatggc
gtttcgtttcagggaattgattttgcagaagacaacggatttacactgatcatcgcgctg
gattgtggaatcaaatcggttgataaggtcgaatatgcgaaacaaaaaggcattgatttt
attatctgcgatcaccatcgtccgggagacgaattgccggaagccattgccgtattggat
ccgaaacgacaggattgtgcctatccgtataaagaattatgcggatgtggtgtcggtttt
aaactaatacaagccttgtcggccaagcgtggacaaagtttacgggatttgattccatat
ttagatttggtagcgacggctatagccgcggatattgttccgattaccggagaaaaccgg
gttttggccaaattcggattggaagtgatcaataagaatccgcgtccggggattaaagca
ctgattaaaaatgtcaaaaaacaggaattaacgatcaccgatgtggtttttattatagcg
ccccgtatcaatgccgccggaaggatcaaacatggtaaccatgcggtagccttattgacc
gagtttaatcagaaacaggcggaggaatttgccagtcagattgaaacttttaatgccgac
cgaaaagatctggacagacagatcaccaaagaagccttaaaacagattgaaacgaatggc
gaacaggaacgatatacaacggttgtctatcaggaagactggcataaaggcgttatcgga
attgtagcttcccgactgacggaagtgtattatcgtccgaccttggttttcaccaaaagt
ggcgataaactggccgcttcggcgcgatcggttaaagatttcgatgtttataatgccttg
gaagcctgttctgattatctggaacaattcggcgggcatatgtatgcggccggattgacg
ctaaaagaaagcgattttgaatcgttcaaaaatcaatttgaaagagtagtatcggaaacc
attacacccgatttgctagtgccggaaatcagtatcgatgccgaaatcgatttttcggat
atcgacgataaacttattcgtatcctaaaacaatttgagccgtttggtccggaaaacatg
acaccggtttttatcgcgcgtcatttaacggatagcggttatggtaaagcaattggtcag
gatgaagaacatctgcgattatttgttaaacaacaacctgaggggaaaggatatgcagcg
attggttttggtctggctaaaaaaatcggacttactcaaaatcaaaaacactttgatgcc
gttttttcaatcgacgaaaacgaatggaacggcactgtaagtgtacaacttcgcttacgg
gatattaaagtatcttaa
DBGET
integrated database retrieval system
