Phnomibacter ginsenosidimutans: GLV81_04115
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Entry
GLV81_04115 CDS
T06320
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
fls
Phnomibacter ginsenosidimutans
Brite
KEGG Orthology (KO) [BR:
fls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fls03036
]
GLV81_04115 (xerD)
Chromosome and associated proteins [BR:
fls03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
GLV81_04115 (xerD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Phage_int_SAM_5
Motif
Other DBs
NCBI-ProteinID:
QGW27389
UniProt:
A0A6I6GQK8
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All DBs
Position
936408..937307
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AA seq
299 aa
AA seq
DB search
MWQPYKKGFKAYLQLERSLSENSVDAYLHDVELLTQWMLLQGLQKNPAAVVQEDLQQFLK
AIAEMGMGANSQARIISGLRAFFKYAMLEQIVQQNPTELLEAPKLKRALPEVLSFGEIEA
IIGAIDQSTPEGVRNKAMLETLYSCGLRVSELVNLQLSQLYMDVGFVRVFGKGSKERLVP
IGRDAVKYIQLYRDNVRVHVPVQKGEEDMVFLNNRGRRLSRVMVFLIIKAMAAKAGITKN
ISPHTFRHSFATHLVEGGADLRAVQEMLGHESITTTEIYTHLDREYLRETLHRFHPAFK
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgtggcagccttacaaaaaagggtttaaagcctacctgcaactggagcggtcgctgagt
gaaaactcagtggatgcttacctgcacgatgtggagctgctaacgcaatggatgttgctg
caaggcctgcaaaaaaatccggctgccgtagtgcaagaagacctgcagcaatttttgaaa
gccattgctgaaatggggatgggcgccaatagccaggcccgcatcatcagcgggttgcgg
gcattttttaagtatgccatgctggagcaaatagtgcagcaaaaccccaccgaattgctg
gaagcacccaagctcaaaagagccttgcccgaagtattgtcgtttggagaaattgaagcc
atcattggtgccattgaccaaagcacccctgaaggtgtgcgtaacaaggccatgctggaa
acgctgtacagctgcggtcttcgggtgagtgagctggtaaatttgcaactgagccagttg
tacatggatgtaggttttgtaagggtgtttggcaagggtagcaaagaacgcctggtgccg
attggtcgtgatgccgtcaagtatattcagctataccgcgacaatgtgcgggtacacgtg
ccggtgcaaaaaggggaagaagacatggtgtttctcaacaaccgtggccgaaggctgagc
agggtgatggtattcctcatcatcaaagccatggccgccaaagcaggcattaccaaaaac
atttcgccacacacatttcgccacagttttgccacgcatttggtggaaggtggtgccgac
ctacgggccgtgcaggaaatgctggggcacgaaagcattaccactacagaaatctataca
cacctcgaccgtgaatatctccgcgaaaccctgcaccgttttcatccggcttttaagtag
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