Phnomibacter ginsenosidimutans: GLV81_05035
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Entry
GLV81_05035 CDS
T06320
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
fls
Phnomibacter ginsenosidimutans
Pathway
fls02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
fls00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GLV81_05035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fls03021
]
GLV81_05035
Transcription machinery [BR:
fls03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GLV81_05035
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
GerE
Sigma70_r2
Sigma70_ECF
HTH_40
HTH_23
HTH_38
HTH_Tnp_ISL3
HTH_AsnC-type
HTH_28
HTH_7
HTH_20
HTH_5
HTH_24
GP68
YqxI
DASH_Dad4
Motif
Other DBs
NCBI-ProteinID:
QGW27546
UniProt:
A0A6I6G4J0
LinkDB
All DBs
Position
1165789..1166367
Genome browser
AA seq
192 aa
AA seq
DB search
MPASYRTYANDELVRLLQQDDAEAFTEIYRRYWQKMFAIAINRLHDSALAEDVVHDVFAS
LWANRTEAAIQTIENYLAVATKYMVLTRLKQQARQQQLLQQAPATLAINDEVELRMQQRQ
LLARIAEEVEKLPEKCRLIFKYSREAGMPVKEIARLLQLSPKTVENQLTKALRQLRVATR
SLFMMLVLFLFF
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcctcttaccgcacatatgcaaacgatgaactggttcgcctgctacagcaggat
gatgcggaggcgtttaccgaaatctatcgccgctactggcaaaagatgtttgccattgcc
atcaaccgcctgcacgacagtgctttggccgaagatgtggtgcacgatgtgtttgccagc
ttgtgggccaaccgcacagaagcggccattcaaaccattgaaaattacctggctgtagcc
accaaatacatggtgctcacccgcctgaaacagcaggcccgccagcagcagttgctgcaa
caggcaccggcaacgctagccatcaacgatgaggttgaactgcggatgcagcagcgccag
ctactggcccgcattgccgaagaggtagaaaaactgcccgaaaagtgccgcctcattttt
aagtacagccgcgaagcaggcatgccggtaaaagagattgcccggttattgcagctatcg
cccaaaacggtggaaaaccaactcaccaaagccctgcgccagttgcgtgtggctacccgc
agcctctttatgatgctggttttgttcctctttttctaa
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