Phnomibacter ginsenosidimutans: GLV81_08675
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Entry
GLV81_08675 CDS
T06320
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
fls
Phnomibacter ginsenosidimutans
Brite
KEGG Orthology (KO) [BR:
fls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fls03009
]
GLV81_08675 (rimO)
Enzymes [BR:
fls01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
GLV81_08675 (rimO)
Ribosome biogenesis [BR:
fls03009
]
Prokaryotic type
ribosomal protein modification factors
GLV81_08675 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Thioredoxin_6
Motif
Other DBs
NCBI-ProteinID:
QGW28157
UniProt:
A0A6I6G731
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All DBs
Position
2001422..2002732
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AA seq
436 aa
AA seq
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MKVRSLTKDKVNIITLGCSKNLVDSETLGGQLRANEIAVVHESGKLDHNIVVVNTCGFID
KAKEESVNTILDQVELKKKGKLDKVYVTGCLSERYRNQLEAEIPEVDAWFGTMELPLMLK
QFNADYKSELLGERMLSTPKHYAYMKISEGCNRTCSFCAIPLMRGGHVSKPMDALVDEAK
ALVQKGVKEVMLIAQELTYYGLDLYKKRTLPDLLHKLADVEGLEWIRLHYAYPSKFPLEI
IDAIKDRPNICNYLDMPLQHASNNMLKAMKRQITREEMEDLVGAIRHKLPEICLRTTLIA
GYPGETRDDVEELKTFLEKMRFDRVGIFTYSHEEGTSAYDVVDDVPADEKQARAQEIMEV
QQEISYEKNQEKVGKTLKVLIDKKEAGRYLGRTEFDSVEVDNEVVIQSAKKLEIGQFYPV
TITKAYDYDLEGVIAQ
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgagaagccttacaaaggataaagtcaacatcatcaccctcgggtgcagcaaa
aacctcgtcgacagcgaaaccttgggtggtcagctccgggccaatgaaatagctgtggtg
catgaatcgggtaaactcgaccacaacatcgtagtggtaaatacctgcggtttcatcgat
aaagccaaagaagaaagtgtcaataccattcttgatcaggtagaactgaagaagaaagga
aagctcgataaagtgtatgtaaccggttgcctcagcgaacgctaccgtaaccagcttgaa
gccgaaataccagaagtggatgcctggtttggtaccatggagctgccattaatgctcaaa
caattcaacgccgattacaaatcggagctgttgggcgaacgcatgcttagtacgcccaag
cattatgcctacatgaaaataagtgaaggttgcaatcgtacctgttccttttgtgccatt
ccgctgatgcgtggtggccatgtaagtaaacctatggatgctttggtggatgaagccaaa
gcgctggttcaaaaaggggtgaaagaagtaatgctgatagcacaggagcttacttactat
gggctggacctgtacaaaaaacgcacattgcccgacctgctgcacaaactggcagatgta
gaaggactggaatggattcgactgcattatgcctatccctccaagtttcctttggaaatc
attgatgcgattaaagaccggccaaacatttgcaactacctcgatatgccgctgcagcat
gccagcaacaatatgctgaaagccatgaagcggcagataacccgcgaagaaatggaagat
ctggtaggtgccatccggcacaaactgccagaaatttgcttgcgtacaacgcttatcgca
ggctaccctggtgaaacacgggacgatgtagaagaactgaaaacctttttggaaaaaatg
cgtttcgacagggtgggcatttttacttatagccatgaagaaggtaccagcgcctatgat
gtagtggacgatgtacctgccgatgaaaagcaggcccgtgcacaagaaatcatggaagtg
cagcaggaaatcagctacgaaaaaaatcaggagaaagtaggcaagacgttgaaagtactt
atagataaaaaagaagctggccgctacctcggaagaactgagtttgatagtgtagaagtg
gacaatgaagtggtgattcaatcagctaaaaaactggagattggccagttctatcctgtc
accattaccaaggcctacgattacgatttagaaggtgtgattgctcaataa
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