Phnomibacter ginsenosidimutans: GLV81_16415
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Entry
GLV81_16415 CDS
T06320
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
fls
Phnomibacter ginsenosidimutans
Pathway
fls03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fls00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GLV81_16415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fls03019
]
GLV81_16415
03400 DNA repair and recombination proteins [BR:
fls03400
]
GLV81_16415
Enzymes [BR:
fls01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GLV81_16415
Messenger RNA biogenesis [BR:
fls03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GLV81_16415
DNA repair and recombination proteins [BR:
fls03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GLV81_16415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
HemN_C
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
QGW29477
UniProt:
A0A6I6G9Z2
LinkDB
All DBs
Position
complement(3803129..3805036)
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AA seq
635 aa
AA seq
DB search
MSASIHSILQSTFGYDQFRPGQQAIIESVLDGNDTLALLPTGGGKSVCYQVPALAMPGIC
IVITPLIALMKDQVRQLHRRNVSALAIHSGMSFFEVKKAMDNAASGHFKFLYVSPERLQT
NLFKEYLPAMDINLIAVDEAHCVSQWGYDFRPSYLQIAQLREELPTVPILALTASATPTV
QQDIMEKLQFSMARKHFQQSFARPNVSFSAFALPQKINKLLQVLQSVPGTALVYCRNRKR
TREIAELLQLQGIASSYYHAGLSSEERNSRQDAWIQNKVRVMVCTNAFGMGIDKPDVRAV
IHMDVPDSLEAYYQEAGRVGRDGKRAYAVLLYSQEELDRLQQLPEQKFLPIAQIQNIYQQ
IGNYLQLPVGQGEQQYFGFDLTRFCETFQLDATQVMHALQTLQTAGYVSFAEQVFIPSRV
QITAGRAYLEQLENDKPALEPLIKLLLRTYEGILDFPVSIREKQLASYLRISVEAVQQQL
KQLAGYQALEYEPLRDTPQLYFLYNRVPAAQVVIDAALYAQRKALYKSQIAAMLEYARAE
QQCRSSIIRRYFGDSDIADCGICDNCLAAKQQPASNEALQTAKASIVALLQKPVTSLQLR
RSCLHISSQVFEAALQQLLEEELIVQTADGSFVQR
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcttccattcattccattttacaatctactttcgggtacgatcagtttcggccg
gggcagcaggccattatagaatcggtactcgatggcaatgatacgctggcactgctgcca
acaggtggtggcaaatcggtttgttatcaggtgccagcgctggccatgcctggcatttgc
atcgttatcacaccactcattgccctcatgaaagatcaggtgcgacaactgcaccggcgc
aatgtatcggcactggctatccatagcggcatgtcttttttcgaagtaaagaaggcgatg
gataatgcagccagcggtcacttcaaatttttgtatgtatcgccggagcggttgcaaacc
aacctcttcaaagagtatctgcccgccatggacatcaacctgatagccgtggatgaagcg
cattgcgtgtcgcaatggggctacgatttcagaccctcttatttacaaattgcacaactc
cgcgaagagttgcctaccgtacccatactggcacttacggcatcggccacgcccaccgtg
cagcaagacatcatggagaagctgcaattctccatggcccgaaaacattttcaacaatct
tttgcacggcccaatgtatcgttcagtgcatttgcgctgccgcaaaaaataaacaagttg
ctgcaggtgctgcagtcggtgccgggtacggccttggtgtattgccgcaaccgaaaacgt
acccgtgaaattgcagagttgttgcagctgcaaggcattgcatcctcgtactatcatgcg
ggactcagcagcgaagaacgcaacagtcgccaagatgcatggatacaaaacaaagtgcgg
gtaatggtatgtaccaatgcctttggcatgggcatcgacaaacccgatgtacgggctgtg
atacacatggatgtgcccgatagtttggaagcttattatcaggaagcggggcgtgtgggc
cgcgatggtaaacgagcctatgccgtgttgctgtacagccaggaagagctggacaggttg
caacaattgcctgagcaaaagtttttgcccattgcacaaatacaaaacatttaccagcag
ataggcaactatttgcagctacctgtagggcagggtgagcaacaatatttcgggttcgat
ttgacccgtttttgcgaaacctttcaactggatgctacccaagtgatgcatgccctgcaa
accttgcaaaccgccggctacgttagttttgccgaacaggtgttcattccaagtcgggtg
caaatcaccgcaggccgggcatatctcgaacagttggaaaacgacaagcctgcactggag
ccacttatcaaactgctgctgcgtacctatgaaggcatcctcgattttccggtgagtatc
cgcgaaaaacaactcgcttcgtatttacgcatttcggtagaagctgtacaacagcaattg
aaacaactggcgggctatcaggcattggaatacgaacccttgcgggatacaccacaactg
tattttttatacaaccgtgtgcccgcagcacaggtagtgattgatgcggcattgtatgcg
caacgcaaggcgttgtacaaatcgcagattgcagcgatgctggaatatgcacgggctgag
cagcaatgtcggagcagcattatccgtcggtattttggcgatagcgacattgctgattgt
ggtatttgtgacaactgcctggcggcaaagcaacaacccgccagcaacgaagctttgcaa
acagctaaagccagcattgtagcgctgttgcaaaagcctgtaacctcattgcagttgcgc
cgcagctgcctgcacatcagcagccaggtatttgaagccgccctgcagcaattgctggaa
gaagaattgattgtgcaaacggcggatggcagtttcgtacagcggtaa
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