KEGG   Candidatus Fermentimicrarchaeum limneticum: Sv326_0221
Entry
Sv326_0221        CDS       T06942                                 
Name
(GenBank) Flap structure-specific endonuclease
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
flt  Candidatus Fermentimicrarchaeum limneticum
Pathway
flt03030  DNA replication
flt03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:flt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Sv326_0221
   03410 Base excision repair
    Sv326_0221
   03450 Non-homologous end-joining
    Sv326_0221
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:flt03032]
    Sv326_0221
   03400 DNA repair and recombination proteins [BR:flt03400]
    Sv326_0221
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:flt04147]
    Sv326_0221
DNA replication proteins [BR:flt03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Sv326_0221
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     Sv326_0221
DNA repair and recombination proteins [BR:flt03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Sv326_0221
Exosome [BR:flt04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Sv326_0221
SSDB
Motif
Pfam: XPG_I XPG_N HHH_5 5_3_exonuc DUF6121
Other DBs
NCBI-ProteinID: QLJ52396
UniProt: A0A7D6BL14
LinkDB
Position
complement(209274..210305)
AA seq 343 aa
MGVELGELVQKDEITLEALSGRVIAVDAYNALYQFLSIIRQPDGTPLMDSKGRITSHLSG
IFYRTAKLIEAGIRPAYVFDGEPPKLKRSVLEGRKEVREKAEERWKDALRRGELAEARVY
AQASSKLSREMVEDAKKLVELMGLPVIQAPGEGEAQAAFLAERNVVDACSSQDYDSLLFG
APRLVRNLTMSGRRKLPRKDVYVDVRTELVELGRSLKALGIDRKGLIWIGILVGTDFNSG
VKGIGPKKALKIVAESSSFEDVFGKFRGEIDADPSEVEGIFLHPAVDENCKVDFGEPNAE
GVVKFLCGEHSFSEDRVRNTLKVMVKVLTEKTMQSSLGDWFGR
NT seq 1032 nt   +upstreamnt  +downstreamnt
atgggagtggagcttggcgagcttgtccagaaggatgagataactctggaggctctgagt
gggagggttatcgcggtggatgcgtacaatgcactataccagttcctctccataataagg
cagcctgatgggacccctctgatggattcgaaaggaaggataacaagccatctctcagga
attttctacaggactgcgaagctcatcgaggcagggatcaggcctgcctacgtttttgac
ggggagccgcccaagctcaagagaagcgttctggaaggcagaaaggaggtcagggagaag
gctgaggagagatggaaggacgccctcaggagaggggagcttgctgaagcaagggtgtac
gcgcaggcttcctccaagctgagcagggagatggttgaggatgcaaagaagcttgtcgag
ctgatggggcttccggttatacaggcgcctggcgagggggaggcgcaggccgcgtttctc
gctgagaggaatgttgtcgatgcatgctcgtcacaggattacgattcgctgttgttcggg
gcgccccggcttgtgagaaacctcacaatgagcggcaggaggaagctccctaggaaggat
gtttacgtggatgtgaggacagaacttgttgagctgggtagaagcctcaaggcacttgga
atcgacaggaaagggctcatctggatcggcatcctggttgggacggacttcaacagcgga
gtgaaggggatagggccgaagaaggcattgaagatcgttgcagaaagcagttcgtttgag
gatgttttcggcaagttccgcggggagattgatgccgatccctcggaagttgaggggata
ttcctgcatccggccgttgacgaaaactgcaaggttgatttcggagagcccaatgccgag
ggagttgtgaagtttctctgcggggagcacagcttctcagaggacagggtcaggaacaca
ttgaaggtgatggtgaaagttttaactgagaaaacaatgcagagcagccttggggactgg
ttcggcaggtga

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