Candidatus Fermentimicrarchaeum limneticum: Sv326_0919
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Entry
Sv326_0919 CDS
T06942
Name
(GenBank) Exosome complex RNA-binding protein Csl4
KO
K07573
exosome complex component CSL4
Organism
flt
Candidatus Fermentimicrarchaeum limneticum
Pathway
flt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
flt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Sv326_0919
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
flt03019
]
Sv326_0919
Messenger RNA biogenesis [BR:
flt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
Sv326_0919
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
Sv326_0919
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ECR1_N
Prok-RING_1
S1
Motif
Other DBs
NCBI-ProteinID:
QLJ53094
UniProt:
A0A7D5XIE2
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All DBs
Position
822656..823216
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AA seq
186 aa
AA seq
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MGEFSTPGKLIGTEEEFVGGEGVFNDCGRLHALYAGEVLVDKQKAVSVKPFPAVPKMVAP
GMVVYGRVEDIFEPIALVKLALVESKGARQAQGDYFSVLHVSNVRRGYVRNLRDEVKVGD
VIKALVTEIRRGEVYLDIKNPDLGVVKAYCSRCRDPLYLKDRILVCGSCGSTERRKLSDE
YSAVER
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaattttccacgccagggaagctgataggcacagaggaggagttcgttggcggc
gaaggagtcttcaacgattgcggcaggctccatgccctatacgcgggcgaggttctggtt
gacaagcagaaggccgtttctgtgaaacctttccctgctgtgccgaagatggttgcgccg
ggcatggttgtctacgggagggttgaggacatattcgagccgatagcgcttgtgaagctc
gcactggtggaatccaaaggcgcaagacaggctcagggtgattacttcagcgtactgcac
gtttcaaatgtcagacgaggttatgtgaggaacctccgggatgaggtcaaggtcggcgat
gtgataaaggcgctcgtcacagagataaggaggggggaggtctacctcgatataaaaaac
ccggatttgggggttgtgaaggcatactgcagcagatgcagggaccccctctacctgaag
gataggatactggtctgcgggtcatgcggcagcacggagagaaggaagctgtccgatgag
tattccgctgttgagaggtga
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