Candidatus Fermentimicrarchaeum limneticum: Sv326_0983
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Entry
Sv326_0983 CDS
T06942
Name
(GenBank) tRNA-splicing endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
flt
Candidatus Fermentimicrarchaeum limneticum
Brite
KEGG Orthology (KO) [BR:
flt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
flt03016
]
Sv326_0983
Enzymes [BR:
flt01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
Sv326_0983
Transfer RNA biogenesis [BR:
flt03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
Sv326_0983
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GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
tRNA_int_end_N2
Motif
Other DBs
NCBI-ProteinID:
QLJ53158
UniProt:
A0A7D6BM94
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All DBs
Position
complement(874862..876022)
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AA seq
386 aa
AA seq
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MGITIEVNKKSRELRVAEPESVSALQNGHYGVMRSGVIHLSPEEALYLMDIRNAKCYDEK
GNELLFNDLARHLYSKKLMARYFTYKDWKDRGLMVRPVEEAKGNYGKNPMKKYPSGKFTS
PKYSIEGVLFPDDLVTIIDDESVGRELYENYWFGQFGSYKAEQRGKLSKLDIYETLFMLK
HCGLHLKNSNERKIRRYVKGLRSDLPYMYEVYEDWRLRGFILKTGFKFGTHFRVYFPKAS
PTKTGEDWVHSRHVIHVFPRRNRMLISEWARAIRVAHSVRKTFILAIPGAKRKAKAKLDF
LLYHRKNGGVETPGKDDPTFVMLSLSEEEHIGGGELAEAIEAAKKLGLDLILAISDRETS
VTYYRVRRIELPGSRYEYYEIEWEQP
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgggcatcacaatagaagtcaacaaaaaaagcagagagctgcgggtagcggagcctgag
tcagtgagcgctctgcagaacggccattacggtgtgatgagaagcggggtaatccacctt
tcccctgaggaggcgctctacctcatggatatcaggaatgccaaatgctacgatgagaag
ggaaatgaacttctcttcaatgatcttgcgaggcatctgtactccaagaagctcatggcg
cgttattttacgtacaaggactggaaggaccgcggcctcatggtgcgccccgttgaagag
gcgaagggaaactacggaaagaatccgatgaagaagtatccttcgggaaaatttacttcc
cccaaatatagcatagagggcgtgttgttcccggatgatttggtcacaatcatcgatgac
gaatctgtgggcagggagctgtacgaaaactactggttcgggcagttcggcagttataag
gcagagcagaggggcaagctgtccaagcttgacatatatgaaactcttttcatgctgaag
cactgcgggctccacctgaagaactcgaacgagagaaaaatcaggagatacgtgaagggg
ctcaggtctgacctgccttacatgtacgaggtttacgaggactggaggctgaggggcttc
atattgaagacaggcttcaagttcggcacccatttcagggtatacttcccaaaggcatcc
ccgacaaagacaggggaggactgggtgcactccaggcacgtcattcacgtcttcccaagg
agaaacaggatgctcatttcggaatgggcaagggcaataagggttgctcacagcgtgagg
aagacgttcatactggcaatcccaggtgcaaaaagaaaggcaaaggcgaaattggacttc
ctgctctaccacaggaagaacggcggtgtggaaacgcctgggaaggatgaccccactttt
gtgatgctttcactcagcgaggaggagcacattggaggcggagaactggcagaggcgatt
gaggctgcaaaaaagcttgggctggacctgattcttgcgataagcgatagggagacctct
gtaacatactacagagtgaggagaatagagcttcctggaagcaggtatgaatattacgag
atagagtgggagcagccctag
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