Candidatus Fermentimicrarchaeum limneticum: Sv326_1132
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Entry
Sv326_1132 CDS
T06942
Name
(GenBank) AAA family ATPase Cdc48
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
flt
Candidatus Fermentimicrarchaeum limneticum
Pathway
flt04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
flt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Sv326_1132
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
flt03019
]
Sv326_1132
03009 Ribosome biogenesis [BR:
flt03009
]
Sv326_1132
04131 Membrane trafficking [BR:
flt04131
]
Sv326_1132
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
flt04147
]
Sv326_1132
Messenger RNA biogenesis [BR:
flt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Sv326_1132
Ribosome biogenesis [BR:
flt03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Sv326_1132
Membrane trafficking [BR:
flt04131
]
SNARE
SNARE associated proteins
Others
Sv326_1132
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Sv326_1132
Exosome [BR:
flt04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Sv326_1132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
CDC48_2
TIP49
AAA_22
AAA_2
AAA_14
AAA_5
AAA_33
nSTAND3
AAA_lid_PRS2_C
AAA_18
AAA_28
Mg_chelatase
NPHP3_N
Vps4_C
ATPase
IstB_IS21
Sigma54_activat
AAA_7
RNA_helicase
AAA_3
DUF815
AAA_24
ABC_tran
ATPase_2
Bac_DnaA
Zeta_toxin
NB-ARC
ATP-synt_ab
Parvo_NS1
AAA_30
SLFN-g3_helicase
AAA_19
PhoH
MCM
Viral_helicase1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QLJ53307
UniProt:
A0A7D5XQ91
LinkDB
All DBs
Position
complement(1004798..1006948)
Genome browser
AA seq
716 aa
AA seq
DB search
MVLKGSELKVVEAYQNDVGRDIVRIDSAARKTLEVTTGDIIEIKGKRITAAVVWQAHPQD
EGLNIIRMDGYLRQNAGVGLQDKVFVRKAETKEAKKVVLSPSEPIRYSPGFDEFVKKRLI
GRAVAKGDTKFIPVFGTSLPLVVALVQPQGIAVINEATEVDLKEEPMKDVGRIAQMTYED
VGGLKEEIQKIREMVELPMRHPELFERLGIEPPKGVLIYGPPGTGKTLLAKAVANESEAH
FTDIAGPELVSKFVGESEERLRQVFKEAEENAPSIIFMDEIDAIAPKREEVTGEVEKRMV
SQLLALMDGLKARGHVIVIGATNRPNSIDPALRRPGRFDREIEIGVPDRNSRKEILQIHT
RNMPLDKDVNLDELANVTHGFTGADISSLSKESAMKSLRRILPKINLEEEFIPPQILEEL
KVTRDDFFNAMRDIQPSALREVFVEIPNVKWEDVGGLENVKMELKEAVELPLKNPEKFTK
MGIRPVRGILLVGLPGTGKTMLAKAVATESEANFISVKGPEFLSKWVGESEKAVRELFRK
ARMAAPCIIFIDELDAVAGLRGGYDEGTHVTERVVNSLLTELDGLQNLKNVVVLAATNRP
DMLDSALLRPGRFDKIIQLPAPDEAMRLEIFKIHTKGMPLAKDVDITVLAKKTEGYTGAD
IEGVCREAGMAAIRSNSEDVKMSHFSDALSQVRPSITKNQVERMKKFVGGEDSMYR
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggtgttgaaaggtagcgagctcaaagttgtggaagcataccagaacgatgttgggagg
gatattgtaaggatagattcggcagcaaggaaaactcttgaggttaccactggtgatata
attgagattaaggggaagaggataactgctgccgtcgtgtggcaggcccacccgcaggat
gaggggctgaacataataaggatggatggatacctgaggcagaacgcaggagttggattg
caggacaaagtctttgttaggaaggctgagacgaaggaggcgaagaaggttgtgctctcg
ccaagcgagccgataaggtattcgcctggttttgatgagtttgtaaagaaacggttaatt
gggagagctgtcgctaaaggagatacgaagtttatccctgtttttgggacttccttgccc
cttgtagtcgcgcttgtgcaaccgcaggggatagcagtgataaacgaggcgactgaagtt
gacctcaaggaggagccgatgaaggatgtcggcaggatagcgcagatgacctacgaggac
gtcggcggcttgaaggaggagatccagaagataagggagatggttgagcttcccatgagg
catcctgagctgtttgagagactgggaatagagccgccgaagggagtgctcatctacggc
ccgccaggaaccggaaagacgctgcttgcaaaagcggttgcgaacgagagcgaggctcac
ttcacagacatcgccggtcctgaactggtgagcaagttcgttggtgagagcgaggaaaga
ctccgtcaggttttcaaggaagctgaggagaatgcaccttcaatcattttcatggatgag
atagatgcgatcgccccgaagagggaggaagtgaccggagaagtggagaagaggatggtt
tcacagctgcttgcccttatggatgggttgaaggcaaggggccacgtgattgtgattgga
gcgacgaacaggcccaactcgattgaccccgctctcaggaggccggggaggtttgacagg
gagatagagataggggtgccggacaggaattcaagaaaggagatactgcagattcacacg
aggaacatgccgcttgacaaggatgttaatctggacgagcttgcaaatgtgacccatggt
ttcaccggagcagacatctcatcactttcaaaagaatctgcaatgaagtcgctcaggagg
atactgcctaaaataaacctggaggaggagttcatcccaccgcagattcttgaggagctg
aaagtcacaagggacgacttcttcaatgcgatgagggacatacagccttccgcgctcagg
gaagtgttcgttgaaatcccgaatgtgaagtgggaggatgtgggagggctagagaacgtc
aagatggagctgaaggaggctgttgaacttccgctgaagaatcccgagaagttcacgaag
atgggcataagaccggtgagggggatactgctggtaggattgcctggaaccggaaagacg
atgcttgcaaaagcggttgcaaccgagagcgaggcaaacttcatatcagtgaaggggccg
gaattcctttccaaatgggtgggggagagcgagaaggccgtgagggagcttttcagaaag
gcaaggatggctgcaccatgcataatcttcatagatgagctagatgcagtcgcaggcctc
agagggggttatgacgaaggcacgcatgtcactgaaagggtggttaactccctgctcact
gagcttgacggcttgcagaacctgaagaatgtggttgtgcttgcagcaacaaataggcct
gacatgcttgattctgcgttgctcagacctggcaggtttgacaagattatacagctgcct
gccccagacgaggcgatgaggcttgagatattcaagatacacacgaagggaatgcctctg
gcaaaggacgttgatataacggtgctggcgaagaagaccgagggatacacgggggccgac
atagaaggggtgtgcagggaagcgggcatggccgcgataagaagcaattcggaggatgtg
aaaatgtcccacttcagtgacgctcttagccaagtcagacccagcatcacaaagaaccaa
gttgaaagaatgaagaagttcgtcggcggagaggacagcatgtacaggtag
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