Candidatus Fermentimicrarchaeum limneticum: Sv326_1136
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Entry
Sv326_1136 CDS
T06942
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
flt
Candidatus Fermentimicrarchaeum limneticum
Brite
KEGG Orthology (KO) [BR:
flt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
flt03032
]
Sv326_1136
03400 DNA repair and recombination proteins [BR:
flt03400
]
Sv326_1136
Enzymes [BR:
flt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Sv326_1136
DNA replication proteins [BR:
flt03032
]
Prokaryotic type
DNA Topoisomerases
Sv326_1136
DNA repair and recombination proteins [BR:
flt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Sv326_1136
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
QLJ53311
LinkDB
All DBs
Position
complement(1009328..1011367)
Genome browser
AA seq
679 aa
AA seq
DB search
MAVLVICEKPRVAERVATALGRDAKRKMFNGVAYYEVERNGEQIYIAPTVGHVYMLKEKN
GGGYPVFDVGWVPSYQVEKSAYYTRKYLETIKFLSKNAKEFVNSCDFDTEGSIIGYNIIR
FACGSKEGKRMRFSTLTEEELAEAYDNRSELDYNNAYAGEARSIIDWLWGINLSRGLMSA
IRKCGEYKVMSIGRVQGPTLKILSLREREIIAFIPVPFWQLFAQCRGVRFTHEKGRFFEK
KEAEEAKKKTERSGTVDKVERKRFEQLPNPPFDLTSLQIEAYRWFGFSPSQTQEIAQSLY
EASLISYPRTASQKLPAKLNLPRIINMLSKNPIYEKFANELIDKRRFHPREGSKDDPAHP
AIFATGVMPKRGTPEAGLKVYDLIAKRFLSCFAENAVREKVHVELLLGDQRYVGDGARVL
KEGWISFYKPYVKFEEIDLSGFNEGEAVEVERLEMKKDKTKPPARYTPASIVQTLEEREL
GTKGTRSMIIDTLYKRGYIEGRGIKVTTFGLAVCDALERHSPEILDEELTRKLEREMEWI
QEGKIEESKVIESGKTVLSEILHDFKKKEHEIGSELVVALKSTNFERNFLGKCPSCGGEL
KIIVSKASGKRFCGCSNYPKCTQSYPIPQFGSITPLKKSCKECGLPMIFVRSGKKVFQMC
IDPKCKSKEGWGKKSTTTK
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgctggttatctgcgagaaaccgcgtgttgcagagagagttgcaaccgcactt
gggagggatgccaagagaaagatgttcaacggtgttgcttactatgaagtggaaaggaat
ggtgagcagatttacatcgctccgacagtgggtcacgtgtacatgctgaaggagaagaat
ggtgggggctatcctgtctttgatgttggatgggtcccttcataccaagttgagaagagc
gcgtactacaccagaaagtatttggaaacgataaagttcctttccaagaatgcgaaggag
ttcgtcaactcgtgcgattttgacaccgaggggagcataattggttacaacatcatccgt
tttgcatgcggaagcaaggaaggcaagaggatgaggttctccactcttacggaggaggag
cttgcggaggcatacgacaacagaagcgagctggattataacaacgcctacgctggggag
gcaagaagcataattgactggctgtggggcataaacctctcaagggggttgatgagcgca
atcagaaagtgcggcgagtataaggtcatgagcataggcagagtgcaaggcccaactctt
aaaatactcagtctgagggagagggagataattgcattcattcctgttccattctggcag
cttttcgcccaatgcagaggggtgagattcacccatgagaaaggaagattcttcgagaag
aaggaagcagaagaggctaagaaaaaaacggaaagaagcgggactgttgacaaggttgag
aggaagagattcgagcagctgcccaacccgccgtttgatttgacttcgctgcagattgag
gcataccggtggttcggcttctcgccgtcacaaacgcaggagattgctcagtccctgtac
gaggccagtttgatttcttatccaagaactgcatcgcagaagctgcccgcaaagctcaat
ctgccgaggataatcaatatgctgtcaaagaatcccatttatgagaagttcgcaaatgag
cttattgacaagagaagattccatccaagggaggggagtaaggacgaccccgcccacccc
gcgatattcgccacaggggtcatgccaaagaggggaactccggaggcagggctgaaggtg
tacgacttgattgccaagaggttcctctcatgctttgcagagaacgcagtgagggagaag
gtgcatgttgagcttctgcttggcgaccagaggtatgtcggcgatggtgcaagggtgctg
aaggaagggtggataagcttctacaagccatacgtgaaattcgaggaaattgacctgtca
ggcttcaatgagggagaggcagttgaagttgaaagattggagatgaagaaggacaagacg
aagccacctgcaaggtatacgcctgcctcgattgtccagactctggaggagagggagctt
ggcacgaaagggacgcgctccatgatcattgacacactgtacaagagaggctatattgaa
ggaaggggcataaaggtgacgaccttcgggcttgccgtgtgcgatgcgcttgagcgccac
tcccccgaaatcctggatgaggagctgactaggaaacttgaaagggagatggagtggata
caggagggcaagatagaggagagcaaggtgattgagagcggtaagacggttctgtcagag
atccttcacgatttcaagaagaaggagcacgagattggcagcgaacttgtggttgcgttg
aagagcactaatttcgagcggaacttccttggcaaatgcccgagctgtgggggcgagttg
aaaattatcgtgtcaaaggcaagcggcaagaggttctgcggctgctccaactacccgaaa
tgcacccagagctaccccataccgcagttcgggagcataacgccgctgaagaagagctgc
aaggaatgcggcttgccaatgatatttgtaaggagcggcaaaaaggttttccagatgtgc
atagaccctaaatgcaagagcaaggaaggctgggggaagaagtcaactaccactaaataa
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