Candidatus Fermentimicrarchaeum limneticum: Sv326_1223
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Entry
Sv326_1223 CDS
T06942
Name
(GenBank) Ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
flt
Candidatus Fermentimicrarchaeum limneticum
Brite
KEGG Orthology (KO) [BR:
flt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
flt03016
]
Sv326_1223
Enzymes [BR:
flt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Sv326_1223
Transfer RNA biogenesis [BR:
flt03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Sv326_1223
Prokaryotic type
Sv326_1223
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_4
Lactamase_B
Motif
Other DBs
NCBI-ProteinID:
QLJ53398
UniProt:
A0A7D6BMK0
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All DBs
Position
1088266..1089147
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AA seq
293 aa
AA seq
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MIKVVILGSGGAVPSPTRSLPSVGLRYFGDVYLFDCGEGTQRQMMIYNLSYAKVKMIFLT
HLHADHLLGIGGLVQTLKMNDRKEPLFIFGPPGTNRAVSPLIAGTYPFQIVIKEIVEDFC
LKNDKFKISSFRTIHNVRSIGYVFQENDSWNFNKEKTDKLGIKGRMFRKLEREGEIVIGK
KRIKLEDVTKPKKGKKFVYTGDTIPCNDVLLASKEADLLIHDGTFSEQQREEAEKKCHST
VSQAAELAKKAKVRKLVLVHMSGRYKDSAPLEKEAKKIFKHSEVGFDGMEISI
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgataaaagtcgtcattctaggctcaggaggggcagtcccatcaccgacccgctcgctg
ccatcggtaggtttgcgctacttcggggacgtttacctgtttgactgcggcgagggaact
cagaggcagatgatgatatacaacctgagctacgccaaggttaagatgatattcctcacc
cacctgcatgcagaccatcttcttgggatagggggtttggtgcagactctcaagatgaac
gacaggaaggagccgttgttcatattcggtccgccaggaaccaaccgcgctgtctccccc
ctaatcgccggaacgtatcccttccagatagtaataaaggagatagtcgaggacttctgc
ctcaagaatgataagttcaaaatttcctccttcagaacaatacataacgtgagaagcatt
ggctatgttttccaggagaacgattcgtggaacttcaacaaggagaaaactgacaagctt
gggataaaggggaggatgttcaggaagcttgagagggagggcgagattgtcatagggaag
aagaggataaagctggaggatgtgaccaagccaaagaagggaaagaaatttgtctacacc
ggagatacaattccttgcaacgatgtcctgcttgcaagtaaagaagcggacttgctcata
cacgacggaacattttctgaacaacagagggaggaagctgagaagaagtgccactcgaca
gtttcacaggctgcagagcttgcaaagaaggcaaaggtcaggaaactggtgctggtgcac
atgagcggcagatacaaggactctgctcctcttgagaaggaggcgaaaaagatattcaag
cactccgaagttggttttgacgggatggaaatatccatttga
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