Candidatus Fermentimicrarchaeum limneticum: Sv326_1242
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Entry
Sv326_1242 CDS
T06942
Name
(GenBank) tRNA pseudouridine(13) synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
flt
Candidatus Fermentimicrarchaeum limneticum
Brite
KEGG Orthology (KO) [BR:
flt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
flt03016
]
Sv326_1242
Enzymes [BR:
flt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Sv326_1242
Transfer RNA biogenesis [BR:
flt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Sv326_1242
Prokaryotic type
Sv326_1242
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QLJ53417
UniProt:
A0A7D6BB08
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All DBs
Position
1106433..1107662
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AA seq
409 aa
AA seq
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MDLAYLSKLSGVGGVLKSSPEDFIVEEITKEGEVLELGKRFEKEGDGDFTRFVLQKRNWN
TLQALREIGNKLHCGMKRFGYAGVKDRNAVTTQLASAFRIDRTALLSVRIKDIQINGAWR
AKEKVRIGELLGNRFTITARDAAADAETAVNGIYADTNGLFPNYFGEQRFGSIRKNTHLV
GKAIVSGNFKEAVWNYLTYLDEAEREEGKEARKKLAEDGDFKKALDYFPKYLGYERTMLN
HLSANPTDYVNALRKLPRGLSLMFVHAYQSYIFNKTLSKKISEGRVSIELGDMFCGKDRF
GFPKLDEVRKAESRAEAGEYLPVGRVIGYETTELSDEERGILEEEGVSEKEFLINSFPEL
SSKGTLRSFFISVEKLRFSYESDKMIFNFCLPSGSYATSLMREFIDRCK
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggatttggcttacctctcgaagctttcaggagtaggaggagtgctgaagagttcccca
gaagatttcatagtagaggagataaccaaggaaggggaagttcttgagctgggcaagcgc
tttgagaaggaaggggacggggatttcacccgcttcgttctgcagaagaggaactggaac
accctgcaggctctcagggagattggcaataagctgcactgcggcatgaagagatttggt
tatgctggtgtgaaggacaggaatgcagtgacaacccagctcgccagcgcgttcagaata
gatcgtacagctctcttgagtgtcagaataaaggacatccagataaacggagcatggaga
gccaaggagaaggtgaggattggagagctgctgggcaacaggttcacgattactgctagg
gatgctgcagctgatgccgagactgcggttaatgggatatatgcagatacaaatggccta
ttcccaaattacttcggagagcagaggttcgggagcataagaaagaacacccatcttgtt
ggaaaggcgattgtttccggaaacttcaaggaagcagtttggaactaccttacgtatctg
gacgaggctgagagagaggaaggaaaggaagcacgtaaaaaacttgcagaggacggggac
ttcaaaaaagcactagactactttccgaaatacctgggatatgagaggaccatgctgaac
catctatcggcaaacccgacggattacgtgaatgcgctgaggaaactgcccagggggctc
tcactgatgtttgtgcatgcttaccaaagttatatattcaataaaaccctaagcaaaaaa
atatcagaaggcagggtttcaatagagttgggggacatgttttgcggaaaagacaggttc
ggctttcctaagttggacgaggtaagaaaggctgaaagcagagcagaggccggcgagtac
ctgccagtgggcagagtcataggatatgaaacgacagaactcagcgatgaggagagaggg
attcttgaggaggagggagtaagcgagaaggagttcttaataaactcctttcctgagctc
agctcgaagggcactctgaggagtttcttcatatcggtagaaaaactgagattcagctac
gagtcagacaagatgatttttaacttctgcctcccctcgggctcctatgcaacatcgctc
atgagagaatttatcgacaggtgcaaatag
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