Candidatus Fluviicola riflensis: CHH17_00170
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Entry
CHH17_00170 CDS
T05019
Name
(GenBank) transcription termination/antitermination protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
flu
Candidatus Fluviicola riflensis
Brite
KEGG Orthology (KO) [BR:
flu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
flu03021
]
CHH17_00170
03009 Ribosome biogenesis [BR:
flu03009
]
CHH17_00170
Transcription machinery [BR:
flu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
CHH17_00170
Ribosome biogenesis [BR:
flu03009
]
Prokaryotic type
rRNA transcription factors
CHH17_00170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
KH_NusA_C
KH_2
S1
KH_1
Myosin_VII_N
Motif
Other DBs
NCBI-ProteinID:
ASS47198
LinkDB
All DBs
Position
29221..30456
Genome browser
AA seq
411 aa
AA seq
DB search
MNSLELVDSFSEFKELKSIDKQTMQHVLEDVFRAMLKKKFNTDEHIDVIVNIDKGDVQIF
VNKEIVADGEVEDSNTEIAYSDAIKIEPDFEIGEEVSEEFRFNDFGRRNILALRQNLISR
ILELEKDHLYKKYKERIGEIITGEVYQVWKKEIMVLDDEGNELILPKSEQIPSDYFKKGE
SIRAVVSKVDMRNSSPVIILSRIAPEFLERLFELEVPEVFDGLITIKRIVREPGERAKVA
VESYDDRIDPVGACVGMKGSRIHGIVRELRNENIDVINFTNNPKLLIQRALSPAKITNIE
TDEENKRASVYLKPDQVSLAIGKGGYNIRLAGKLTGYEIDVFRDGEADVEDVDLEEFADE
IDSWILDELKAVGCDTAKSVLELSLEDLVQRTDLEEETIQEVLKILRSEFE
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcttggaattggtagattcgttttcggagtttaaagaactcaaaagcatcgac
aaacaaacgatgcagcatgtattggaagacgtatttcgtgcaatgttgaagaaaaaattc
aacaccgatgaacacatcgatgtcattgtgaatattgacaaaggtgacgttcagattttt
gtgaataaagagattgtcgccgacggtgaagtagaagattcgaacaccgaaatcgcttac
tcggacgctattaaaatcgaaccggatttcgaaatcggtgaagaagtttccgaggaattc
cgtttcaatgacttcggtcgtcgtaacatcctggcacttcgtcaaaacctgatttcacgt
atccttgaattggagaaagatcacctttacaagaaatacaaagagcgtatcggtgaaatc
attaccggtgaagtttaccaggtttggaagaaagagatcatggtattggatgatgaaggt
aatgagttgatcttgccgaaatcggagcaaattccttccgattacttcaaaaaaggagaa
tctattcgtgcggtggtatcgaaagtggatatgcgtaatagcagtccggtaattatcctt
tcacgtatcgcacctgagttccttgagcgtttgttcgaattggaagttccggaagtattc
gacggattgatcaccattaagcgtatcgtgcgtgaaccgggagagcgtgctaaagtagca
gtagaatcatacgatgaccgtatcgatcctgttggagcttgtgtaggtatgaaaggttcg
cgtattcatggaatcgttcgcgaattacgcaacgaaaacattgacgtgatcaatttcaca
aataatcctaagctattgatccagcgcgcattgtctccggctaaaattactaatattgaa
accgacgaagaaaataaacgcgcaagtgtttatttgaaaccagaccaggtgtcgttggct
atcggaaaaggtggttacaacattcgccttgccggtaaattgacaggatatgaaatagat
gtgttcagagacggagaagctgacgtggaagatgttgatttggaagaatttgcagatgaa
atcgatagctggatccttgacgaattgaaggctgtcggttgcgacactgccaagtctgtt
ttggaattatcgttagaggatttggtgcaacgtaccgacctcgaggaagagactattcag
gaagttctaaagattcttcgttcggaattcgaataa
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