Candidatus Fluviicola riflensis: CHH17_01090
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Entry
CHH17_01090 CDS
T05019
Name
(GenBank) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
flu
Candidatus Fluviicola riflensis
Pathway
flu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
flu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CHH17_01090
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
flu01007
]
CHH17_01090
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
flu03016
]
CHH17_01090
03029 Mitochondrial biogenesis [BR:
flu03029
]
CHH17_01090
Enzymes [BR:
flu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
CHH17_01090
Amino acid related enzymes [BR:
flu01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
CHH17_01090
Transfer RNA biogenesis [BR:
flu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CHH17_01090
Mitochondrial biogenesis [BR:
flu03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
CHH17_01090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
TMP_N
Motif
Other DBs
NCBI-ProteinID:
ASS47375
LinkDB
All DBs
Position
261788..263326
Genome browser
AA seq
512 aa
AA seq
DB search
MEQKEDLLKEVIGHAKEYGFVFPSSEIYDGLAATYDYGQLGAELKNNIKQYWWKSMVQMN
ENIVGLDSSIFMHPTVWKASGHVDAFNDPLIDNKDSKKRYRADVLIEEHMEKILQKINKE
VEKASKKFGDAFDEAQFRATNPNVLRNAEKITSIEDRMRTTLENNDLEGVKQLIEDLEIV
CPISGTRNWTEVRQFNLMFSTEMGSVAGDASTIYLRPETAQGIFVNFLNVQKTGRMKIPF
GIAQIGKAFRNEIVARQFIFRMREFEQMEMQFFVRPGEEMQWYNHWKAARLNWHKKLGLG
DQYYREHDHIKLAHYANAASDIEFDFPMGFKELEGIHSRTDFDLKQHEQYSGKKLQYFDT
ELNQNYVPYVVETSVGLDRMFLAVLSASYKNEVLEDGSERVVLTIPPALAPYKVAVMPLT
KKDGLPEKAREIIDELKFDFLCQYDEKDSIGKRYRRQDAIGTPFSVTVDHQTLEDNTVTI
RDRDTMEQIRVPITELHARIDAKVSWRSLLAN
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaaaggaagacttgttgaaagaagtgatcggacacgccaaagaatatggtttt
gtgttcccttcttctgagatttacgatggtttggcggcgacttacgattatggtcaattg
ggtgccgaactcaaaaacaacatcaaacaatattggtggaaatcaatggtccagatgaac
gaaaacatcgttgggcttgattcttcgatctttatgcacccaacggtttggaaagcttcc
gggcatgttgacgcgttcaatgatccgttgatcgacaataaagattccaaaaaacgttac
cgcgccgatgtgttgatcgaagaacacatggaaaagatcttgcagaagatcaacaaggaa
gtggaaaaagcttccaaaaaattcggtgatgcgtttgacgaagcacagtttcgtgcaacc
aatccgaatgtattgcgcaacgctgagaaaattacttctatcgaagatcgcatgcgcacg
acgcttgaaaataatgaccttgagggcgtaaaacaattgatcgaagatctggagattgtt
tgtccgatcagcggtacgcgtaactggaccgaagtgcgtcagttcaacctgatgttttcg
accgaaatgggttctgtagccggcgatgcttctacgatttacctgcgtccggaaacggct
cagggtatttttgtgaacttcctgaatgttcagaaaacgggccgcatgaagattccgttt
ggaattgctcaaatcggaaaagcgttccggaacgagatcgtagcgcgccagtttatcttc
cgtatgcgcgaattcgaacagatggaaatgcagttttttgtgcgtccgggtgaagaaatg
cagtggtacaatcactggaaagcagcgcgcttgaactggcataaaaaactgggcttgggc
gatcagtattaccgtgagcacgatcatatcaaactggcacattacgctaatgcagcttcc
gatatcgagtttgatttcccaatgggtttcaaagaactggaaggaattcattctcgcact
gatttcgacttaaaacaacacgaacaatattccggtaaaaaactccagtatttcgatact
gagctgaatcagaattacgttccgtatgtagtggaaacatccgttggtttggaccgtatg
ttcctggcggtattgagcgcttcgtataaaaatgaggtattggaagacggttcggaacgt
gttgtgttgaccattccaccggcattggctccatataaagtagcggtaatgcctttaacg
aagaaagatggtttaccggaaaaagcgcgcgagatcatcgatgaattgaagttcgatttt
ctttgccaatacgatgaaaaagactctatcggaaaacgttaccgtcgccaggatgccatt
ggtacgccgttctctgtaacggttgatcaccaaacgttggaagacaatacggttacgatc
cgtgatcgtgatacgatggagcaaattcgggttccgattaccgaattacacgcacgcatc
gatgccaaagtcagctggcggtcgttgttagcgaattga
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