Candidatus Fluviicola riflensis: CHH17_01335
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Entry
CHH17_01335 CDS
T05019
Name
(GenBank) hypothetical protein
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
flu
Candidatus Fluviicola riflensis
Pathway
flu00540
Lipopolysaccharide biosynthesis
flu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
flu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
CHH17_01335
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
flu01005
]
CHH17_01335
Enzymes [BR:
flu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
CHH17_01335
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
CHH17_01335
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
CHH17_01335
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
CHH17_01335
Lipopolysaccharide biosynthesis proteins [BR:
flu01005
]
Lipid A
CHH17_01335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Motif
Other DBs
NCBI-ProteinID:
ASS47420
LinkDB
All DBs
Position
330003..331214
Genome browser
AA seq
403 aa
AA seq
DB search
MRLLYAIGMGGLYCLMWCASLFNVKAKKWITGRKTPVTDFKIPENKQTVWFHCASLGEFD
QGLPVMFAYKERFPDAFLVVTFFSPSGMEFYNKRHHCVDLACYLPLDTASNARKFIAHFK
PKDVFFVKYEFWYNHLLAAKRSGSKVYGVSSLFRPTHRFFKWYGGFFRSALRLFDHFYVQ
DQRSKDLLAGIGIHQTTLSGDTRYDRMIAVRDKGDSNEILADFTYGKPTLILGSSWPVDE
DTLLTSLLELHKRMKIIIAPHDISEQHISAIAALFGNEVVRYTNYVSSPENQVLILDTIG
QLTSAYRYATIAYVGGGFTGKLHNILEPGAFGIPVIFGPKHERFPEAQLFLDREVAVEVT
DSGELEELVSQLLKRKTEIAEELKLIFQENSGAAKKVVAGLKD
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgctttacgccattggaatggggggtttgtactgcttgatgtggtgcgcttcg
ctgttcaatgtcaaagccaagaagtggatcacaggccgaaaaaccccggttaccgatttt
aaaattcccgaaaacaaacaaacagtttggtttcattgcgcttctttgggtgaattcgac
cagggattgccggtgatgtttgcttacaaggaacgatttccggatgcatttttagtggtt
acgtttttcagtccgtcaggaatggaattttacaacaaacgccatcattgtgtcgattta
gcatgctatcttccgttggatacagcttccaacgcccgaaaattcattgcacatttcaaa
ccgaaagacgttttttttgtgaaatacgaattctggtacaatcacttacttgccgccaaa
cgttctggttcaaaagtttacggagtaagtagtctgtttcgtcccacacatcgttttttc
aaatggtacggtggcttttttcgttctgctttgcgattgtttgatcatttttatgtgcag
gaccaacggtcgaaagatttactggccggcatcgggattcatcaaacaacactttccggc
gacacacgctacgatcgcatgatcgctgttcgtgataaaggcgattccaatgaaattctg
gccgatttcacatacggaaaaccgacgttgattctcggcagttcgtggcctgtcgatgaa
gatacgttactaacttctctcttggagctccacaagcggatgaaaatcattattgctccg
cacgatatttctgaacagcacatttcggctatcgcagcgctgtttggcaatgaggtggtt
cgttacacgaattatgtttcttcaccggaaaatcaggttctcattttagatacaatcggg
caattgacctcggcttaccggtatgcaacaattgcctatgtaggtggtggatttaccgga
aaactgcataacatcctggaacccggagcttttggtattccggttattttcggcccgaaa
cacgaacgttttccggaggcgcaattgttccttgaccgagaagttgcagttgaggtaacc
gattcgggtgaactcgaagagttggtgagtcaactgctgaaacgaaaaaccgaaattgcg
gaagagttgaagttgatttttcaggaaaacagcggagcagcgaagaaggttgtggctggt
ttgaaggattaa
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