Candidatus Fluviicola riflensis: CHH17_01395
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Entry
CHH17_01395 CDS
T05019
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
flu
Candidatus Fluviicola riflensis
Pathway
flu00521
Streptomycin biosynthesis
flu00523
Polyketide sugar unit biosynthesis
flu00541
Biosynthesis of various nucleotide sugars
flu01100
Metabolic pathways
flu01110
Biosynthesis of secondary metabolites
flu01250
Biosynthesis of nucleotide sugars
Module
flu_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
flu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CHH17_01395 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CHH17_01395 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CHH17_01395 (rfbC)
Enzymes [BR:
flu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
CHH17_01395 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
MAAL_N
Motif
Other DBs
NCBI-ProteinID:
ASS47432
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All DBs
Position
complement(346730..347275)
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AA seq
181 aa
AA seq
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MVIEQTHLEGVLLFSPRIFSDNRGHFFESFNHRDFESAVGFPVEFVQDNESVSHRNVLRG
LHFQLPPMSQGKLVRVVQGSVLDVAVDLRKNSSTFGKHVAVQLSSENKKQLWIPPGFAHG
FLSLEEGTIFSYKCTNYYAPETECTLQWNDPELGINWGIEKPVISAKDQNSLLFHTFTTP
F
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggtgattgaacaaacccatttagaaggtgttttactgtttagtccgcggatcttttcc
gacaatcgcggtcatttttttgaaagttttaatcaccgtgactttgaatcggccgttgga
ttcccggttgagtttgtacaggacaatgaatctgtttcgcaccggaatgtattgcgcggc
ctccattttcagttaccaccgatgtcacaaggcaaactggttcgggtcgtacaaggttca
gtactggatgtggctgttgatctgaggaaaaacagttccaccttcgggaaacatgttgcc
gtgcaattatcttccgaaaacaaaaaacagctgtggattccaccgggatttgcgcatggt
tttttaagcctcgaagaaggaacgatcttcagttataaatgcaccaattattacgctccg
gaaaccgaatgtacccttcagtggaacgatcccgaactggggataaactgggggatcgaa
aaaccggtcatttcggccaaagaccaaaattcgcttcttttccatacctttacaacaccc
ttttaa
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