Candidatus Fluviicola riflensis: CHH17_01530
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Entry
CHH17_01530 CDS
T05019
Name
(GenBank) cysteine desulfurase CsdA
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
flu
Candidatus Fluviicola riflensis
Pathway
flu00450
Selenocompound metabolism
flu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
flu00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
CHH17_01530
Enzymes [BR:
flu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
CHH17_01530
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
CHH17_01530
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Ortholog
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Motif
Pfam:
Aminotran_5
Aminotran_1_2
Cys_Met_Meta_PP
Beta_elim_lyase
SelA
Motif
Other DBs
NCBI-ProteinID:
ASS47456
LinkDB
All DBs
Position
complement(376584..377819)
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AA seq
411 aa
AA seq
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MGLVEKRKFSVREIRQDFPALRQQIYGKNLIYFDNGATSQKPQLVLDAINQYYSKNNANI
HRGVHFMSQQATSEYEMSREYIKSFINAEKQEEIIFTKGTTDGINLVAYSYGSLLSAGDE
ILISAMEHHSNIVPWQLLCERKGLILKVIPINSRGELKLDVYEELLSDKTKLVAVTHISN
TLGTINPLKIIIDKAHATGAKVLVDGAQSIQHTKVDVQDLDCDFFVFSGHKVFGPTGIGV
LYGKEDLLDKMPPYQGGGDMIAKVTFERSTYNELPFKFEAGTPHIAGGICLGTALQYLNQ
FNIEDVEQYERSLADYAQDLISTFEGVKIIGTAKDKTSVVSFHVDGLHPFDIGTLLDKQG
IAVRTGHHCTQPLMDIFKIPGTIRASFAFYNTREEIDTFIAAVEKSISMLR
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgggtctagtagaaaaacgaaaattcagcgtacgagaaatcagacaggattttccggcg
ttacgccaacagatatacggtaagaacctcatttattttgataatggtgctacctcgcaa
aaaccacagctggtgctggatgcgatcaatcaatattacagtaagaacaacgcgaatatt
caccgtggtgtgcactttatgagtcagcaggcgacttctgaatatgaaatgtcgagggaa
tacatcaaatcgtttatcaacgctgaaaaacaggaagaaattattttcaccaaaggaaca
accgacggtataaacctggtggcttattcttacggatcgttgctttctgcgggagatgaa
attctcatttctgccatggagcaccattccaatatcgttccgtggcaattgctatgcgaa
cgaaaaggcttgattttaaaggtgattccgataaatagccgcggagaattaaaactcgat
gtgtacgaagaattgctttccgataaaacaaaattggtggccgtaacgcatatttcgaat
acgctcggcacgatcaatccgttgaaaataatcattgataaagcccacgcaaccggagcg
aaagtattggtagatggcgcgcagagtattcagcacacgaaagtagatgtgcaggacctc
gactgtgatttctttgttttttccgggcacaaggtattcggacctaccggaatcggtgtt
ttgtacggaaaagaagatttgcttgataaaatgccgccttaccagggtggtggtgatatg
attgcaaaagtgacgtttgagcgttctacttacaacgaattaccatttaagtttgaagca
ggaacgccacacattgccggtggaatctgccttggaacagcattgcaatacctcaaccaa
ttcaatattgaagacgtagagcaatacgaacgcagcctggcagattatgcccaggacctg
atctcgacgtttgaaggcgtaaaaattatcggtacggcaaaagataaaacaagtgtggtg
tcttttcacgttgatggacttcatccgttcgatatcggaactttacttgataaacaagga
atcgcagtacgaaccggacatcattgtacacaacccttaatggatattttcaagatcccg
ggaacaatccgcgcttcgtttgctttttacaatacccgcgaagaaatagacacgttcata
gctgctgtggaaaaaagtatcagcatgttgcgttaa
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